Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 SON-203ENST00000381679 7860 ntTSL 5 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 AL121761.2-201ENST00000598007 1648 ntBASIC8.84□□□□□ -0.99
LINC01554Q52M75 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 ABALON-201ENST00000629058 1903 ntBASIC8.84□□□□□ -0.99
LINC01554Q52M75 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 TERF1P5-201ENST00000477545 1207 ntBASIC8.84□□□□□ -0.99
LINC01554Q52M75 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 SLC7A5P1-201ENST00000568957 537 ntBASIC8.84□□□□□ -0.99
LINC01554Q52M75 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 AC010536.3-201ENST00000620306 533 ntBASIC8.84□□□□□ -0.99
LINC01554Q52M75 AC008694.1-202ENST00000636953 945 ntBASIC8.84□□□□□ -0.99
LINC01554Q52M75 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 AC139749.1-202ENST00000617529 3139 ntBASIC8.84□□□□□ -0.99
LINC01554Q52M75 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01554Q52M75 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
LINC01554Q52M75 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
LINC01554Q52M75 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC8.84□□□□□ -1
LINC01554Q52M75 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
LINC01554Q52M75 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
LINC01554Q52M75 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 CNTNAP3P2-201ENST00000617175 3861 ntBASIC8.83□□□□□ -1
LINC01554Q52M75 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
LINC01554Q52M75 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC8.83□□□□□ -1
LINC01554Q52M75 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC8.83□□□□□ -1
LINC01554Q52M75 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 AL391807.1-203ENST00000604392 2365 ntBASIC8.83□□□□□ -1
LINC01554Q52M75 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC8.83□□□□□ -1
LINC01554Q52M75 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms