Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC58Q4VC31 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 AC009949.1-201ENST00000623048 1830 ntBASIC15.69■□□□□ 0.1
CCDC58Q4VC31 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.69■□□□□ 0.1
CCDC58Q4VC31 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.69■□□□□ 0.1
CCDC58Q4VC31 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 AC113410.3-201ENST00000623366 203 ntBASIC15.69■□□□□ 0.1
CCDC58Q4VC31 AC010653.2-201ENST00000623505 997 ntBASIC15.69■□□□□ 0.1
CCDC58Q4VC31 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC58Q4VC31 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 SEC1P-202ENST00000473944 940 ntBASIC15.68■□□□□ 0.1
CCDC58Q4VC31 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 AC113404.2-201ENST00000507884 177 ntBASIC15.68■□□□□ 0.1
CCDC58Q4VC31 CD99P1-205ENST00000527459 561 ntBASIC15.68■□□□□ 0.1
CCDC58Q4VC31 AC233702.5-201ENST00000584107 538 ntBASIC15.68■□□□□ 0.1
CCDC58Q4VC31 AL049637.2-201ENST00000641778 930 ntBASIC15.68■□□□□ 0.1
CCDC58Q4VC31 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC58Q4VC31 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms