Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MIR6080-201ENST00000617359 66 ntBASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 AL049812.1-201ENST00000432563 2267 ntBASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO4Q2I0M5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.83■□□□□ 0.29
RSPO4Q2I0M5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.83■□□□□ 0.29
RSPO4Q2I0M5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 LINC00982-205ENST00000420957 435 ntBASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 RNF165-205ENST00000588679 2904 ntBASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 UXT-AS1-201ENST00000590504 1525 ntBASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RSPO4Q2I0M5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RSPO4Q2I0M5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 AC138969.3-201ENST00000546612 1459 ntBASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 AC138932.2-201ENST00000548268 1459 ntBASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 AC126755.4-201ENST00000549796 1459 ntBASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 MIR658-201ENST00000385210 100 ntBASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 SPCS2P4-201ENST00000436160 681 ntBASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 AC140658.5-201ENST00000438532 169 ntBASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 ACA64.2-201ENST00000459014 129 ntBASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.81■□□□□ 0.28
RSPO4Q2I0M5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms