Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.58■□□□□ 0.25
GABREP78334 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
GABREP78334 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GABREP78334 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
GABREP78334 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
GABREP78334 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
GABREP78334 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
GABREP78334 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GABREP78334 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GABREP78334 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GABREP78334 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GABREP78334 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.58■□□□□ 0.24
GABREP78334 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GABREP78334 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GABREP78334 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.58■□□□□ 0.24
GABREP78334 COX20P2-201ENST00000452636 358 ntBASIC16.58■□□□□ 0.24
GABREP78334 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.58■□□□□ 0.24
GABREP78334 AL096865.1-201ENST00000606796 927 ntBASIC16.58■□□□□ 0.24
GABREP78334 AC019129.2-201ENST00000609837 1235 ntBASIC16.58■□□□□ 0.24
GABREP78334 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.58■□□□□ 0.24
GABREP78334 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GABREP78334 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GABREP78334 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.58■□□□□ 0.24
GABREP78334 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.58■□□□□ 0.24
GABREP78334 AC126763.1-201ENST00000552015 2118 ntBASIC16.58■□□□□ 0.24
GABREP78334 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GABREP78334 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.58■□□□□ 0.24
GABREP78334 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GABREP78334 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GABREP78334 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
GABREP78334 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GABREP78334 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
GABREP78334 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.57■□□□□ 0.24
GABREP78334 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
GABREP78334 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.57■□□□□ 0.24
GABREP78334 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.57■□□□□ 0.24
GABREP78334 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GABREP78334 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
GABREP78334 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
GABREP78334 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.57■□□□□ 0.24
GABREP78334 AC092474.2-201ENST00000424288 719 ntBASIC16.57■□□□□ 0.24
GABREP78334 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.57■□□□□ 0.24
GABREP78334 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.57■□□□□ 0.24
GABREP78334 OR7E47P-204ENST00000575924 449 ntBASIC16.57■□□□□ 0.24
GABREP78334 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.57■□□□□ 0.24
GABREP78334 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 AL513210.1-201ENST00000629608 234 ntBASIC16.57■□□□□ 0.24
GABREP78334 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GABREP78334 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
GABREP78334 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.57■□□□□ 0.24
GABREP78334 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GABREP78334 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.57■□□□□ 0.24
GABREP78334 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GABREP78334 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.57■□□□□ 0.24
GABREP78334 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GABREP78334 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
GABREP78334 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
GABREP78334 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GABREP78334 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.56■□□□□ 0.24
GABREP78334 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.56■□□□□ 0.24
GABREP78334 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GABREP78334 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GABREP78334 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GABREP78334 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.56■□□□□ 0.24
GABREP78334 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.56■□□□□ 0.24
GABREP78334 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GABREP78334 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.56■□□□□ 0.24
GABREP78334 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GABREP78334 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
GABREP78334 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.56■□□□□ 0.24
GABREP78334 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.56■□□□□ 0.24
GABREP78334 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.56■□□□□ 0.24
GABREP78334 IGHV3-52-201ENST00000519770 353 ntBASIC16.56■□□□□ 0.24
GABREP78334 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.56■□□□□ 0.24
GABREP78334 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
GABREP78334 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
GABREP78334 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GABREP78334 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.56■□□□□ 0.24
GABREP78334 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GABREP78334 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.56■□□□□ 0.24
GABREP78334 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.55■□□□□ 0.24
GABREP78334 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.55■□□□□ 0.24
GABREP78334 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
GABREP78334 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms