Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.3□□□□□ -0.12
LMO4P61968 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
LMO4P61968 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.3□□□□□ -0.12
LMO4P61968 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO4P61968 AC211476.1-201ENST00000503899 468 ntBASIC14.3□□□□□ -0.12
LMO4P61968 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.3□□□□□ -0.12
LMO4P61968 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.3□□□□□ -0.12
LMO4P61968 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO4P61968 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
LMO4P61968 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO4P61968 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO4P61968 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LMO4P61968 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO4P61968 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.3□□□□□ -0.12
LMO4P61968 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LMO4P61968 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LMO4P61968 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.3□□□□□ -0.12
LMO4P61968 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.29□□□□□ -0.12
LMO4P61968 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.29□□□□□ -0.12
LMO4P61968 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LMO4P61968 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LMO4P61968 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
LMO4P61968 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.29□□□□□ -0.12
LMO4P61968 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
LMO4P61968 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.29□□□□□ -0.12
LMO4P61968 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.29□□□□□ -0.12
LMO4P61968 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.29□□□□□ -0.12
LMO4P61968 DNAJB3-202ENST00000449667 1266 ntBASIC14.29□□□□□ -0.12
LMO4P61968 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.29□□□□□ -0.12
LMO4P61968 ALG1L5P-201ENST00000482043 771 ntBASIC14.29□□□□□ -0.12
LMO4P61968 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.29□□□□□ -0.12
LMO4P61968 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.29□□□□□ -0.12
LMO4P61968 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.29□□□□□ -0.12
LMO4P61968 KRT19P2-202ENST00000557173 1012 ntBASIC14.29□□□□□ -0.12
LMO4P61968 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.29□□□□□ -0.12
LMO4P61968 PDPK2P-202ENST00000562415 1191 ntBASIC14.29□□□□□ -0.12
LMO4P61968 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.29□□□□□ -0.12
LMO4P61968 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
LMO4P61968 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.29□□□□□ -0.12
LMO4P61968 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LMO4P61968 BCAR1-209ENST00000546196 1340 ntBASIC14.29□□□□□ -0.12
LMO4P61968 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LMO4P61968 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.29□□□□□ -0.12
LMO4P61968 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LMO4P61968 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LMO4P61968 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.29□□□□□ -0.12
LMO4P61968 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LMO4P61968 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO4P61968 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LMO4P61968 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LMO4P61968 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO4P61968 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO4P61968 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LMO4P61968 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO4P61968 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO4P61968 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO4P61968 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.28□□□□□ -0.12
LMO4P61968 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LMO4P61968 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO4P61968 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LMO4P61968 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LMO4P61968 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LMO4P61968 HTR5BP-201ENST00000430851 1154 ntBASIC14.28□□□□□ -0.12
LMO4P61968 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.28□□□□□ -0.12
LMO4P61968 MKNK2P1-201ENST00000437526 628 ntBASIC14.28□□□□□ -0.12
LMO4P61968 AP006288.1-201ENST00000446065 395 ntBASIC14.28□□□□□ -0.12
LMO4P61968 PAWRP1-201ENST00000451083 565 ntBASIC14.28□□□□□ -0.12
LMO4P61968 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LMO4P61968 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.28□□□□□ -0.12
LMO4P61968 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.28□□□□□ -0.12
LMO4P61968 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.28□□□□□ -0.12
LMO4P61968 MIR4469-201ENST00000583919 79 ntBASIC14.28□□□□□ -0.12
LMO4P61968 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.28□□□□□ -0.12
LMO4P61968 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.28□□□□□ -0.12
LMO4P61968 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.28□□□□□ -0.12
LMO4P61968 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.28□□□□□ -0.12
LMO4P61968 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LMO4P61968 AC012317.2-201ENST00000623305 2251 ntBASIC14.28□□□□□ -0.12
LMO4P61968 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO4P61968 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms