Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PPP4CP60510 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4CP60510 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.59■□□□□ 0.89
PPP4CP60510 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4CP60510 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4CP60510 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4CP60510 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PPP4CP60510 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4CP60510 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4CP60510 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PPP4CP60510 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4CP60510 FAM185BP-201ENST00000443595 716 ntBASIC20.59■□□□□ 0.89
PPP4CP60510 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.59■□□□□ 0.89
PPP4CP60510 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.59■□□□□ 0.89
PPP4CP60510 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.59■□□□□ 0.89
PPP4CP60510 AC004877.2-201ENST00000623941 599 ntBASIC20.59■□□□□ 0.89
PPP4CP60510 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PPP4CP60510 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4CP60510 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4CP60510 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4CP60510 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4CP60510 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4CP60510 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.59■□□□□ 0.89
PPP4CP60510 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PPP4CP60510 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4CP60510 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PPP4CP60510 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4CP60510 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4CP60510 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4CP60510 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4CP60510 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4CP60510 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4CP60510 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4CP60510 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.58■□□□□ 0.89
PPP4CP60510 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4CP60510 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4CP60510 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4CP60510 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.58■□□□□ 0.89
PPP4CP60510 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4CP60510 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.58■□□□□ 0.89
PPP4CP60510 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.58■□□□□ 0.89
PPP4CP60510 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.58■□□□□ 0.89
PPP4CP60510 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
PPP4CP60510 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.58■□□□□ 0.89
PPP4CP60510 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.58■□□□□ 0.89
PPP4CP60510 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4CP60510 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4CP60510 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.58■□□□□ 0.88
PPP4CP60510 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4CP60510 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PPP4CP60510 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4CP60510 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4CP60510 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.57■□□□□ 0.88
PPP4CP60510 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4CP60510 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4CP60510 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4CP60510 SLC25A6P2-201ENST00000497974 877 ntBASIC20.57■□□□□ 0.88
PPP4CP60510 CXCL1P1-201ENST00000502804 216 ntBASIC20.57■□□□□ 0.88
PPP4CP60510 YBX1P5-201ENST00000509441 847 ntBASIC20.57■□□□□ 0.88
PPP4CP60510 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.57■□□□□ 0.88
PPP4CP60510 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.57■□□□□ 0.88
PPP4CP60510 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.57■□□□□ 0.88
PPP4CP60510 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.57■□□□□ 0.88
PPP4CP60510 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PPP4CP60510 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.57■□□□□ 0.88
PPP4CP60510 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.57■□□□□ 0.88
PPP4CP60510 AL691403.2-201ENST00000618460 490 ntBASIC20.57■□□□□ 0.88
PPP4CP60510 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PPP4CP60510 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4CP60510 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4CP60510 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.56■□□□□ 0.88
PPP4CP60510 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.56■□□□□ 0.88
PPP4CP60510 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4CP60510 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4CP60510 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4CP60510 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.56■□□□□ 0.88
PPP4CP60510 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4CP60510 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4CP60510 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PPP4CP60510 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PPP4CP60510 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.56■□□□□ 0.88
PPP4CP60510 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.56■□□□□ 0.88
PPP4CP60510 KRT19P2-202ENST00000557173 1012 ntBASIC20.56■□□□□ 0.88
PPP4CP60510 PDPK2P-202ENST00000562415 1191 ntBASIC20.56■□□□□ 0.88
PPP4CP60510 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4CP60510 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4CP60510 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PPP4CP60510 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4CP60510 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4CP60510 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4CP60510 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4CP60510 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.56■□□□□ 0.88
PPP4CP60510 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.56■□□□□ 0.88
PPP4CP60510 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.55■□□□□ 0.88
PPP4CP60510 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4CP60510 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4CP60510 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4CP60510 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4CP60510 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4CP60510 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms