Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.15■□□□□ 0.18
SMIM11AP58511 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SMIM11AP58511 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMIM11AP58511 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.15■□□□□ 0.18
SMIM11AP58511 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMIM11AP58511 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SMIM11AP58511 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.15■□□□□ 0.18
SMIM11AP58511 MIR4497-201ENST00000583208 89 ntBASIC16.15■□□□□ 0.18
SMIM11AP58511 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SMIM11AP58511 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SMIM11AP58511 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMIM11AP58511 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMIM11AP58511 AC106886.4-201ENST00000623557 2502 ntBASIC16.15■□□□□ 0.18
SMIM11AP58511 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMIM11AP58511 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SMIM11AP58511 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SMIM11AP58511 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMIM11AP58511 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.15■□□□□ 0.18
SMIM11AP58511 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SMIM11AP58511 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SMIM11AP58511 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMIM11AP58511 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMIM11AP58511 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
SMIM11AP58511 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
SMIM11AP58511 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
SMIM11AP58511 LINC01568-207ENST00000641790 1380 ntBASIC16.14■□□□□ 0.17
SMIM11AP58511 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SMIM11AP58511 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SMIM11AP58511 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.14■□□□□ 0.17
SMIM11AP58511 MYCLP1-201ENST00000372451 1075 ntBASIC16.14■□□□□ 0.17
SMIM11AP58511 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SMIM11AP58511 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.14■□□□□ 0.17
SMIM11AP58511 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.14■□□□□ 0.17
SMIM11AP58511 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.14■□□□□ 0.17
SMIM11AP58511 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SMIM11AP58511 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SMIM11AP58511 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.14■□□□□ 0.17
SMIM11AP58511 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SMIM11AP58511 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.14■□□□□ 0.17
SMIM11AP58511 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMIM11AP58511 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.13■□□□□ 0.17
SMIM11AP58511 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.13■□□□□ 0.17
SMIM11AP58511 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SMIM11AP58511 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.13■□□□□ 0.17
SMIM11AP58511 AC096633.1-201ENST00000422446 749 ntBASIC16.13■□□□□ 0.17
SMIM11AP58511 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.13■□□□□ 0.17
SMIM11AP58511 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.13■□□□□ 0.17
SMIM11AP58511 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.13■□□□□ 0.17
SMIM11AP58511 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.13■□□□□ 0.17
SMIM11AP58511 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.13■□□□□ 0.17
SMIM11AP58511 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.13■□□□□ 0.17
SMIM11AP58511 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.13■□□□□ 0.17
SMIM11AP58511 LINC02012-201ENST00000608206 1725 ntBASIC16.13■□□□□ 0.17
SMIM11AP58511 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM11AP58511 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms