Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN2P57739 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN2P57739 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN2P57739 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN2P57739 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN2P57739 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN2P57739 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN2P57739 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN2P57739 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CLDN2P57739 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN2P57739 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
CLDN2P57739 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 UPF3AP3-201ENST00000420996 769 ntBASIC17.24■□□□□ 0.35
CLDN2P57739 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN2P57739 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN2P57739 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN2P57739 IGHV3-65-201ENST00000523210 341 ntBASIC17.24■□□□□ 0.35
CLDN2P57739 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN2P57739 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN2P57739 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN2P57739 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.24■□□□□ 0.35
CLDN2P57739 AC004790.2-201ENST00000623588 572 ntBASIC17.24■□□□□ 0.35
CLDN2P57739 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN2P57739 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN2P57739 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CLDN2P57739 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CLDN2P57739 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN2P57739 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN2P57739 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN2P57739 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN2P57739 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN2P57739 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN2P57739 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN2P57739 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN2P57739 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN2P57739 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLDN2P57739 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN2P57739 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN2P57739 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN2P57739 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN2P57739 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN2P57739 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN2P57739 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLDN2P57739 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN2P57739 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLDN2P57739 MYCLP1-201ENST00000372451 1075 ntBASIC17.23■□□□□ 0.35
CLDN2P57739 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN2P57739 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.23■□□□□ 0.35
CLDN2P57739 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN2P57739 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLDN2P57739 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.23■□□□□ 0.35
CLDN2P57739 RPSAP43-201ENST00000402237 625 ntBASIC17.23■□□□□ 0.35
CLDN2P57739 PTCHD3P3-201ENST00000403073 906 ntBASIC17.23■□□□□ 0.35
CLDN2P57739 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLDN2P57739 CRYGEP-201ENST00000412192 528 ntBASIC17.23■□□□□ 0.35
CLDN2P57739 GPX1P2-201ENST00000429271 606 ntBASIC17.23■□□□□ 0.35
CLDN2P57739 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.23■□□□□ 0.35
CLDN2P57739 AC112482.1-201ENST00000492080 688 ntBASIC17.23■□□□□ 0.35
CLDN2P57739 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.23■□□□□ 0.35
CLDN2P57739 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.23■□□□□ 0.35
CLDN2P57739 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.23■□□□□ 0.35
CLDN2P57739 AC008667.4-201ENST00000607370 168 ntBASIC17.23■□□□□ 0.35
CLDN2P57739 AL691403.2-201ENST00000618460 490 ntBASIC17.23■□□□□ 0.35
CLDN2P57739 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN2P57739 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CLDN2P57739 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN2P57739 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLDN2P57739 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLDN2P57739 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN2P57739 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN2P57739 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN2P57739 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN2P57739 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN2P57739 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN2P57739 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN2P57739 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN2P57739 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN2P57739 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN2P57739 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN2P57739 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLDN2P57739 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN2P57739 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms