Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
RAB38P57729 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB38P57729 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB38P57729 TPM4P1-201ENST00000436100 807 ntBASIC16.44■□□□□ 0.22
RAB38P57729 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.44■□□□□ 0.22
RAB38P57729 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RAB38P57729 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB38P57729 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.44■□□□□ 0.22
RAB38P57729 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.44■□□□□ 0.22
RAB38P57729 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.44■□□□□ 0.22
RAB38P57729 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB38P57729 SART3-203ENST00000546611 1184 ntBASIC16.44■□□□□ 0.22
RAB38P57729 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB38P57729 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
RAB38P57729 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB38P57729 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB38P57729 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB38P57729 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB38P57729 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB38P57729 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAB38P57729 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB38P57729 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAB38P57729 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB38P57729 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB38P57729 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB38P57729 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAB38P57729 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB38P57729 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB38P57729 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RAB38P57729 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RAB38P57729 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.43■□□□□ 0.22
RAB38P57729 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.43■□□□□ 0.22
RAB38P57729 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB38P57729 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB38P57729 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB38P57729 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RAB38P57729 AL022326.1-202ENST00000641533 845 ntBASIC16.43■□□□□ 0.22
RAB38P57729 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RAB38P57729 PCDHB18P-201ENST00000524813 2368 ntBASIC16.43■□□□□ 0.22
RAB38P57729 AC016396.2-201ENST00000562575 1417 ntBASIC16.43■□□□□ 0.22
RAB38P57729 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
RAB38P57729 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB38P57729 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB38P57729 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RAB38P57729 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB38P57729 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB38P57729 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB38P57729 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB38P57729 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RAB38P57729 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB38P57729 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB38P57729 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB38P57729 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB38P57729 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB38P57729 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB38P57729 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAB38P57729 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB38P57729 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB38P57729 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB38P57729 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB38P57729 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 AC079781.3-201ENST00000449110 356 ntBASIC16.42■□□□□ 0.22
RAB38P57729 PRYP5-201ENST00000451909 266 ntBASIC16.42■□□□□ 0.22
RAB38P57729 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RAB38P57729 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.42■□□□□ 0.22
RAB38P57729 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RAB38P57729 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB38P57729 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB38P57729 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB38P57729 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB38P57729 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms