Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CLDN12P56749 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
CLDN12P56749 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN12P56749 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN12P56749 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN12P56749 AC007663.1-201ENST00000438948 1240 ntBASIC15.25■□□□□ 0.03
CLDN12P56749 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN12P56749 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 CD99P1-205ENST00000527459 561 ntBASIC15.25■□□□□ 0.03
CLDN12P56749 AC008687.5-201ENST00000593746 558 ntBASIC15.25■□□□□ 0.03
CLDN12P56749 AC026471.5-201ENST00000615068 467 ntBASIC15.25■□□□□ 0.03
CLDN12P56749 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CLDN12P56749 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 AL162727.3-201ENST00000635661 2787 ntBASIC15.25■□□□□ 0.03
CLDN12P56749 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN12P56749 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN12P56749 AL603756.1-201ENST00000606511 2163 ntBASIC15.25■□□□□ 0.03
CLDN12P56749 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN12P56749 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN12P56749 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.24■□□□□ 0.03
CLDN12P56749 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN12P56749 AC046185.3-201ENST00000623228 1824 ntBASIC15.24■□□□□ 0.03
CLDN12P56749 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CLDN12P56749 RNF216P1-203ENST00000404404 2427 ntBASIC15.24■□□□□ 0.03
CLDN12P56749 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLDN12P56749 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN12P56749 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN12P56749 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN12P56749 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN12P56749 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CLDN12P56749 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLDN12P56749 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLDN12P56749 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLDN12P56749 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CLDN12P56749 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN12P56749 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLDN12P56749 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLDN12P56749 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
CLDN12P56749 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN12P56749 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN12P56749 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CLDN12P56749 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN12P56749 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 AL390955.1-201ENST00000428694 934 ntBASIC15.23■□□□□ 0.03
CLDN12P56749 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN12P56749 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CLDN12P56749 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
CLDN12P56749 AC116562.4-202ENST00000641738 218 ntBASIC15.23■□□□□ 0.03
CLDN12P56749 AL049637.2-201ENST00000641778 930 ntBASIC15.23■□□□□ 0.03
CLDN12P56749 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CLDN12P56749 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN12P56749 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms