Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL356309.3-201ENST00000624132 1934 ntBASIC13.05□□□□□ -0.32
CMC4P56277 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.05□□□□□ -0.32
CMC4P56277 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
CMC4P56277 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CMC4P56277 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.04□□□□□ -0.32
CMC4P56277 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
CMC4P56277 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CMC4P56277 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.04□□□□□ -0.32
CMC4P56277 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CMC4P56277 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CMC4P56277 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CMC4P56277 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.04□□□□□ -0.32
CMC4P56277 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
CMC4P56277 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CMC4P56277 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.04□□□□□ -0.32
CMC4P56277 DUSP5P1-201ENST00000441325 1139 ntBASIC13.04□□□□□ -0.32
CMC4P56277 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.04□□□□□ -0.32
CMC4P56277 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.04□□□□□ -0.32
CMC4P56277 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.04□□□□□ -0.32
CMC4P56277 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.04□□□□□ -0.32
CMC4P56277 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.04□□□□□ -0.32
CMC4P56277 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
CMC4P56277 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 AL732292.2-201ENST00000609649 430 ntBASIC13.04□□□□□ -0.32
CMC4P56277 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CMC4P56277 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CMC4P56277 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.04□□□□□ -0.32
CMC4P56277 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 SIRPAP1-201ENST00000448467 1770 ntBASIC13.04□□□□□ -0.32
CMC4P56277 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.04□□□□□ -0.32
CMC4P56277 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.04□□□□□ -0.32
CMC4P56277 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CMC4P56277 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CMC4P56277 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.03□□□□□ -0.32
CMC4P56277 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.03□□□□□ -0.32
CMC4P56277 AC079776.2-201ENST00000641154 1609 ntBASIC13.03□□□□□ -0.32
CMC4P56277 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.03□□□□□ -0.32
CMC4P56277 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.03□□□□□ -0.32
CMC4P56277 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.03□□□□□ -0.32
CMC4P56277 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
CMC4P56277 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.03□□□□□ -0.32
CMC4P56277 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.03□□□□□ -0.32
CMC4P56277 AC073648.2-201ENST00000510116 352 ntBASIC13.03□□□□□ -0.32
CMC4P56277 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.03□□□□□ -0.32
CMC4P56277 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.03□□□□□ -0.32
CMC4P56277 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.03□□□□□ -0.32
CMC4P56277 AL022326.1-202ENST00000641533 845 ntBASIC13.03□□□□□ -0.32
CMC4P56277 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CMC4P56277 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.03□□□□□ -0.32
CMC4P56277 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CMC4P56277 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.03□□□□□ -0.32
CMC4P56277 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.03□□□□□ -0.32
CMC4P56277 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CMC4P56277 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.03□□□□□ -0.32
CMC4P56277 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CMC4P56277 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms