Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 TPSP2-201ENST00000561760 610 ntBASIC17.28■□□□□ 0.36
CDKN2DP55273 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDKN2DP55273 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CDKN2DP55273 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKN2DP55273 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKN2DP55273 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDKN2DP55273 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDKN2DP55273 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.28■□□□□ 0.36
CDKN2DP55273 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKN2DP55273 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
CDKN2DP55273 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDKN2DP55273 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKN2DP55273 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKN2DP55273 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKN2DP55273 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKN2DP55273 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKN2DP55273 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CDKN2DP55273 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKN2DP55273 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.27■□□□□ 0.36
CDKN2DP55273 NKILA-202ENST00000614771 2598 ntBASIC17.27■□□□□ 0.36
CDKN2DP55273 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKN2DP55273 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDKN2DP55273 AC103564.2-201ENST00000432853 1299 ntBASIC17.27■□□□□ 0.36
CDKN2DP55273 DRAXINP1-201ENST00000437611 948 ntBASIC17.27■□□□□ 0.36
CDKN2DP55273 VENTXP7-201ENST00000475503 772 ntBASIC17.27■□□□□ 0.36
CDKN2DP55273 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.27■□□□□ 0.36
CDKN2DP55273 AC009533.2-201ENST00000543664 586 ntBASIC17.27■□□□□ 0.36
CDKN2DP55273 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKN2DP55273 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.27■□□□□ 0.36
CDKN2DP55273 AP002414.4-201ENST00000589764 1148 ntBASIC17.27■□□□□ 0.36
CDKN2DP55273 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CDKN2DP55273 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKN2DP55273 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKN2DP55273 AL121761.2-201ENST00000598007 1648 ntBASIC17.27■□□□□ 0.36
CDKN2DP55273 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKN2DP55273 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDKN2DP55273 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.27■□□□□ 0.35
CDKN2DP55273 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDKN2DP55273 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.27■□□□□ 0.35
CDKN2DP55273 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CDKN2DP55273 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.27■□□□□ 0.35
CDKN2DP55273 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDKN2DP55273 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDKN2DP55273 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.26■□□□□ 0.35
CDKN2DP55273 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 AC011676.5-201ENST00000624864 2660 ntBASIC17.26■□□□□ 0.35
CDKN2DP55273 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDKN2DP55273 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDKN2DP55273 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.26■□□□□ 0.35
CDKN2DP55273 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.26■□□□□ 0.35
CDKN2DP55273 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.26■□□□□ 0.35
CDKN2DP55273 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDKN2DP55273 STK25P1-201ENST00000585406 838 ntBASIC17.26■□□□□ 0.35
CDKN2DP55273 AC011467.2-201ENST00000598425 242 ntBASIC17.26■□□□□ 0.35
CDKN2DP55273 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.26■□□□□ 0.35
CDKN2DP55273 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.26■□□□□ 0.35
CDKN2DP55273 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 AC093525.9-201ENST00000624961 1746 ntBASIC17.26■□□□□ 0.35
CDKN2DP55273 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.26■□□□□ 0.35
CDKN2DP55273 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.26■□□□□ 0.35
CDKN2DP55273 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDKN2DP55273 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKN2DP55273 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKN2DP55273 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKN2DP55273 AL353593.2-201ENST00000602529 1483 ntBASIC17.25■□□□□ 0.35
CDKN2DP55273 TP73-AS1-210ENST00000637775 1455 ntBASIC17.25■□□□□ 0.35
CDKN2DP55273 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKN2DP55273 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKN2DP55273 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKN2DP55273 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKN2DP55273 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.25■□□□□ 0.35
CDKN2DP55273 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKN2DP55273 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKN2DP55273 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKN2DP55273 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms