Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAD23BP54727 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.7■□□□□ 0.58
RAD23BP54727 PMPCAP1-201ENST00000508114 1576 ntBASIC18.7■□□□□ 0.58
RAD23BP54727 IGHV3-52-201ENST00000519770 353 ntBASIC18.7■□□□□ 0.58
RAD23BP54727 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.7■□□□□ 0.58
RAD23BP54727 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RAD23BP54727 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAD23BP54727 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.7■□□□□ 0.58
RAD23BP54727 AP001269.4-201ENST00000609611 512 ntBASIC18.7■□□□□ 0.58
RAD23BP54727 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RAD23BP54727 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RAD23BP54727 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.7■□□□□ 0.58
RAD23BP54727 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.7■□□□□ 0.58
RAD23BP54727 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.7■□□□□ 0.58
RAD23BP54727 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.7■□□□□ 0.58
RAD23BP54727 AC132938.5-201ENST00000624980 1813 ntBASIC18.7■□□□□ 0.58
RAD23BP54727 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.7■□□□□ 0.58
RAD23BP54727 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.69■□□□□ 0.58
RAD23BP54727 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAD23BP54727 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
RAD23BP54727 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.69■□□□□ 0.58
RAD23BP54727 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.69■□□□□ 0.58
RAD23BP54727 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.69■□□□□ 0.58
RAD23BP54727 LYSMD4-203ENST00000378904 2122 ntBASIC18.69■□□□□ 0.58
RAD23BP54727 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.69■□□□□ 0.58
RAD23BP54727 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.69■□□□□ 0.58
RAD23BP54727 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.69■□□□□ 0.58
RAD23BP54727 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.69■□□□□ 0.58
RAD23BP54727 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.69■□□□□ 0.58
RAD23BP54727 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RAD23BP54727 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.69■□□□□ 0.58
RAD23BP54727 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.69■□□□□ 0.58
RAD23BP54727 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.69■□□□□ 0.58
RAD23BP54727 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.69■□□□□ 0.58
RAD23BP54727 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.69■□□□□ 0.58
RAD23BP54727 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RAD23BP54727 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAD23BP54727 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.68■□□□□ 0.58
RAD23BP54727 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
RAD23BP54727 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RAD23BP54727 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.68■□□□□ 0.58
RAD23BP54727 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RAD23BP54727 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.68■□□□□ 0.58
RAD23BP54727 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.68■□□□□ 0.58
RAD23BP54727 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.68■□□□□ 0.58
RAD23BP54727 AC111152.3-201ENST00000569699 673 ntBASIC18.68■□□□□ 0.58
RAD23BP54727 STK25P1-201ENST00000585406 838 ntBASIC18.68■□□□□ 0.58
RAD23BP54727 IFNL4P1-201ENST00000607083 540 ntBASIC18.68■□□□□ 0.58
RAD23BP54727 AL139327.4-201ENST00000612362 153 ntBASIC18.68■□□□□ 0.58
RAD23BP54727 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RAD23BP54727 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.68■□□□□ 0.58
RAD23BP54727 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.68■□□□□ 0.58
RAD23BP54727 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.68■□□□□ 0.58
RAD23BP54727 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.68■□□□□ 0.58
RAD23BP54727 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD23BP54727 PP12613-201ENST00000424958 2230 ntBASIC18.68■□□□□ 0.58
RAD23BP54727 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RAD23BP54727 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.67■□□□□ 0.58
RAD23BP54727 AP005117.1-201ENST00000584346 1413 ntBASIC18.67■□□□□ 0.58
RAD23BP54727 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RAD23BP54727 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms