Protein–RNA interactions for Protein: P53677

AP3M2, AP-3 complex subunit mu-2, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M2P53677 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3M2P53677 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
AP3M2P53677 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3M2P53677 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.79■□□□□ 0.6
AP3M2P53677 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
AP3M2P53677 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3M2P53677 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.79■□□□□ 0.6
AP3M2P53677 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3M2P53677 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3M2P53677 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.79■□□□□ 0.6
AP3M2P53677 RN7SL510P-201ENST00000581311 263 ntBASIC18.79■□□□□ 0.6
AP3M2P53677 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.79■□□□□ 0.6
AP3M2P53677 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
AP3M2P53677 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3M2P53677 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
AP3M2P53677 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
AP3M2P53677 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 AL135999.2-201ENST00000622438 1686 ntBASIC18.79■□□□□ 0.6
AP3M2P53677 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3M2P53677 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3M2P53677 AC148477.5-201ENST00000625164 1645 ntBASIC18.78■□□□□ 0.6
AP3M2P53677 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3M2P53677 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.78■□□□□ 0.6
AP3M2P53677 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3M2P53677 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3M2P53677 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.78■□□□□ 0.6
AP3M2P53677 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.78■□□□□ 0.6
AP3M2P53677 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3M2P53677 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
AP3M2P53677 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.78■□□□□ 0.6
AP3M2P53677 ACTG1P4-201ENST00000425123 1122 ntBASIC18.78■□□□□ 0.6
AP3M2P53677 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.78■□□□□ 0.6
AP3M2P53677 EMBP1-201ENST00000458200 901 ntBASIC18.78■□□□□ 0.6
AP3M2P53677 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.78■□□□□ 0.6
AP3M2P53677 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.78■□□□□ 0.6
AP3M2P53677 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
AP3M2P53677 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3M2P53677 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
AP3M2P53677 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3M2P53677 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3M2P53677 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
AP3M2P53677 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
AP3M2P53677 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
AP3M2P53677 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3M2P53677 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3M2P53677 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.78■□□□□ 0.6
AP3M2P53677 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.77■□□□□ 0.6
AP3M2P53677 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
AP3M2P53677 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.77■□□□□ 0.6
AP3M2P53677 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.77■□□□□ 0.6
AP3M2P53677 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
AP3M2P53677 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.77■□□□□ 0.6
AP3M2P53677 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.77■□□□□ 0.6
AP3M2P53677 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.77■□□□□ 0.6
AP3M2P53677 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.77■□□□□ 0.6
AP3M2P53677 AL121912.1-201ENST00000603683 238 ntBASIC18.77■□□□□ 0.6
AP3M2P53677 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.77■□□□□ 0.6
AP3M2P53677 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.77■□□□□ 0.6
AP3M2P53677 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.77■□□□□ 0.6
AP3M2P53677 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3M2P53677 AL023806.1-201ENST00000603994 1649 ntBASIC18.77■□□□□ 0.6
AP3M2P53677 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3M2P53677 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3M2P53677 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3M2P53677 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
AP3M2P53677 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3M2P53677 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms