Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NKX2-5P52952 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.89□□□□□ -0.03
NKX2-5P52952 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 MIR572-201ENST00000384983 95 ntBASIC14.89□□□□□ -0.03
NKX2-5P52952 GUSBP5-201ENST00000418136 578 ntBASIC14.89□□□□□ -0.03
NKX2-5P52952 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.89□□□□□ -0.03
NKX2-5P52952 AC016405.3-201ENST00000607710 860 ntBASIC14.89□□□□□ -0.03
NKX2-5P52952 AC106881.1-201ENST00000605849 3329 ntBASIC14.89□□□□□ -0.03
NKX2-5P52952 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NKX2-5P52952 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NKX2-5P52952 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NKX2-5P52952 AC022532.1-201ENST00000624563 1728 ntBASIC14.89□□□□□ -0.03
NKX2-5P52952 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.89□□□□□ -0.03
NKX2-5P52952 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-5P52952 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX2-5P52952 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NKX2-5P52952 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-5P52952 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-5P52952 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-5P52952 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX2-5P52952 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NKX2-5P52952 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-5P52952 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NKX2-5P52952 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-5P52952 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.88□□□□□ -0.03
NKX2-5P52952 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-5P52952 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-5P52952 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.88□□□□□ -0.03
NKX2-5P52952 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-5P52952 AC107918.4-201ENST00000641966 3141 ntBASIC14.88□□□□□ -0.03
NKX2-5P52952 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-5P52952 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 HTR7P1-201ENST00000538670 1336 ntBASIC14.88□□□□□ -0.03
NKX2-5P52952 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 AC092053.1-201ENST00000605787 1936 ntBASIC14.88□□□□□ -0.03
NKX2-5P52952 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-5P52952 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NKX2-5P52952 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-5P52952 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-5P52952 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NKX2-5P52952 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NKX2-5P52952 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-5P52952 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-5P52952 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NKX2-5P52952 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NKX2-5P52952 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-5P52952 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-5P52952 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
NKX2-5P52952 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-5P52952 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-5P52952 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-5P52952 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NKX2-5P52952 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NKX2-5P52952 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX2-5P52952 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-5P52952 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NKX2-5P52952 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-5P52952 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-5P52952 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms