Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGA2P52926 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.97■□□□□ 0.15
HMGA2P52926 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGA2P52926 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGA2P52926 AL441883.1-201ENST00000566170 1045 ntBASIC15.97■□□□□ 0.15
HMGA2P52926 GPR32P1-201ENST00000601788 811 ntBASIC15.97■□□□□ 0.15
HMGA2P52926 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
HMGA2P52926 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HMGA2P52926 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGA2P52926 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
HMGA2P52926 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HMGA2P52926 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.96■□□□□ 0.15
HMGA2P52926 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.96■□□□□ 0.15
HMGA2P52926 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 IGHV3-52-201ENST00000519770 353 ntBASIC15.96■□□□□ 0.15
HMGA2P52926 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.96■□□□□ 0.15
HMGA2P52926 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HMGA2P52926 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
HMGA2P52926 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA2P52926 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
HMGA2P52926 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.14
HMGA2P52926 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.96■□□□□ 0.14
HMGA2P52926 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
HMGA2P52926 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HMGA2P52926 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGA2P52926 AC092068.3-201ENST00000587894 2016 ntBASIC15.95■□□□□ 0.14
HMGA2P52926 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGA2P52926 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
HMGA2P52926 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HMGA2P52926 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
HMGA2P52926 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HMGA2P52926 PCDH8P1-201ENST00000428983 2773 ntBASIC15.95■□□□□ 0.14
HMGA2P52926 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGA2P52926 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGA2P52926 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGA2P52926 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGA2P52926 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGA2P52926 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HMGA2P52926 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HMGA2P52926 SPDYE15P-201ENST00000424157 909 ntBASIC15.95■□□□□ 0.14
HMGA2P52926 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.95■□□□□ 0.14
HMGA2P52926 COX11P1-201ENST00000489116 835 ntBASIC15.95■□□□□ 0.14
HMGA2P52926 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 ZNF444P1-201ENST00000559497 298 ntBASIC15.95■□□□□ 0.14
HMGA2P52926 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGA2P52926 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
HMGA2P52926 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGA2P52926 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
HMGA2P52926 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGA2P52926 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA2P52926 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HMGA2P52926 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HMGA2P52926 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms