Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5CP51148 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
RAB5CP51148 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5CP51148 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5CP51148 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB5CP51148 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5CP51148 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB5CP51148 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB5CP51148 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5CP51148 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB5CP51148 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
RAB5CP51148 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB5CP51148 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5CP51148 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5CP51148 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5CP51148 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
RAB5CP51148 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB5CP51148 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5CP51148 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5CP51148 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 REXO1L11P-201ENST00000620964 1927 ntBASIC14.09□□□□□ -0.15
RAB5CP51148 LYSMD4-203ENST00000378904 2122 ntBASIC14.09□□□□□ -0.15
RAB5CP51148 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB5CP51148 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5CP51148 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5CP51148 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAB5CP51148 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAB5CP51148 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5CP51148 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAB5CP51148 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RAB5CP51148 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5CP51148 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RAB5CP51148 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5CP51148 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5CP51148 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB5CP51148 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB5CP51148 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5CP51148 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB5CP51148 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 AC104640.1-201ENST00000562617 2109 ntBASIC14.09□□□□□ -0.15
RAB5CP51148 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5CP51148 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RAB5CP51148 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
RAB5CP51148 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB5CP51148 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5CP51148 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
RAB5CP51148 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAB5CP51148 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.08□□□□□ -0.15
RAB5CP51148 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB5CP51148 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAB5CP51148 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
RAB5CP51148 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.08□□□□□ -0.15
RAB5CP51148 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB5CP51148 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB5CP51148 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB5CP51148 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RAB5CP51148 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RAB5CP51148 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB5CP51148 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5CP51148 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5CP51148 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5CP51148 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
RAB5CP51148 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB5CP51148 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5CP51148 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5CP51148 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB5CP51148 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5CP51148 SBF1P1-201ENST00000444527 5631 ntBASIC14.08□□□□□ -0.16
RAB5CP51148 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5CP51148 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5CP51148 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5CP51148 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RAB5CP51148 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB5CP51148 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RAB5CP51148 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.08□□□□□ -0.16
RAB5CP51148 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB5CP51148 AC009065.1-201ENST00000564055 1225 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms