Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
UBE2AP49459 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2AP49459 KRT18P48-201ENST00000434763 852 ntBASIC11.14□□□□□ -0.63
UBE2AP49459 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 RASA4DP-201ENST00000460726 1199 ntBASIC11.14□□□□□ -0.63
UBE2AP49459 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.14□□□□□ -0.63
UBE2AP49459 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2AP49459 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2AP49459 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
UBE2AP49459 AC024563.2-201ENST00000603282 481 ntBASIC11.14□□□□□ -0.63
UBE2AP49459 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
UBE2AP49459 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
UBE2AP49459 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
UBE2AP49459 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
UBE2AP49459 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
UBE2AP49459 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2AP49459 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
UBE2AP49459 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC11.14□□□□□ -0.63
UBE2AP49459 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
UBE2AP49459 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2AP49459 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 AC012313.1-201ENST00000593393 3059 ntBASIC11.14□□□□□ -0.63
UBE2AP49459 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC11.14□□□□□ -0.63
UBE2AP49459 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 NME9-203ENST00000383180 2133 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2AP49459 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
UBE2AP49459 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2AP49459 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 LINC00602-201ENST00000629776 2065 ntBASIC11.13□□□□□ -0.63
UBE2AP49459 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC11.13□□□□□ -0.63
UBE2AP49459 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
UBE2AP49459 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.13□□□□□ -0.63
UBE2AP49459 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
UBE2AP49459 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC11.13□□□□□ -0.63
UBE2AP49459 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
UBE2AP49459 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
UBE2AP49459 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 AC113347.1-201ENST00000413321 391 ntBASIC11.13□□□□□ -0.63
UBE2AP49459 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 BX664615.1-201ENST00000443558 458 ntBASIC11.13□□□□□ -0.63
UBE2AP49459 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
UBE2AP49459 AC092647.4-201ENST00000457211 535 ntBASIC11.13□□□□□ -0.63
UBE2AP49459 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC11.13□□□□□ -0.63
UBE2AP49459 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC11.13□□□□□ -0.63
UBE2AP49459 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC11.13□□□□□ -0.63
UBE2AP49459 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC11.13□□□□□ -0.63
UBE2AP49459 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
UBE2AP49459 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.13□□□□□ -0.63
UBE2AP49459 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC11.13□□□□□ -0.63
UBE2AP49459 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms