Protein–RNA interactions for Protein: P46020

PHKA1, Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform, humanhuman

Predictions only

Length 1,223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1P46020 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PHKA1P46020 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHKA1P46020 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
PHKA1P46020 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.12■□□□□ 0.97
PHKA1P46020 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHKA1P46020 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHKA1P46020 KRT18P13-201ENST00000400056 1290 ntBASIC21.12■□□□□ 0.97
PHKA1P46020 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PHKA1P46020 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PHKA1P46020 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.12■□□□□ 0.97
PHKA1P46020 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.12■□□□□ 0.97
PHKA1P46020 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHKA1P46020 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHKA1P46020 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHKA1P46020 AC133963.1-201ENST00000504166 1679 ntBASIC21.12■□□□□ 0.97
PHKA1P46020 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PHKA1P46020 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHKA1P46020 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.11■□□□□ 0.97
PHKA1P46020 AC018470.1-201ENST00000624790 3129 ntBASIC21.11■□□□□ 0.97
PHKA1P46020 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PHKA1P46020 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHKA1P46020 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHKA1P46020 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHKA1P46020 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.11■□□□□ 0.97
PHKA1P46020 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
PHKA1P46020 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHKA1P46020 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.11■□□□□ 0.97
PHKA1P46020 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PHKA1P46020 BX842568.4-201ENST00000421222 227 ntBASIC21.11■□□□□ 0.97
PHKA1P46020 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PHKA1P46020 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.11■□□□□ 0.97
PHKA1P46020 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHKA1P46020 MIR4751-201ENST00000578027 74 ntBASIC21.11■□□□□ 0.97
PHKA1P46020 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
PHKA1P46020 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
PHKA1P46020 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.11■□□□□ 0.97
PHKA1P46020 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PHKA1P46020 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PHKA1P46020 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PHKA1P46020 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHKA1P46020 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PHKA1P46020 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.11■□□□□ 0.97
PHKA1P46020 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
PHKA1P46020 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
PHKA1P46020 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHKA1P46020 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHKA1P46020 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.1■□□□□ 0.97
PHKA1P46020 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.1■□□□□ 0.97
PHKA1P46020 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHKA1P46020 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHKA1P46020 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHKA1P46020 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PHKA1P46020 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHKA1P46020 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PHKA1P46020 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
PHKA1P46020 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHKA1P46020 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.1■□□□□ 0.97
PHKA1P46020 AP002414.1-201ENST00000391405 1147 ntBASIC21.1■□□□□ 0.97
PHKA1P46020 RNA5SP416-201ENST00000516838 111 ntBASIC21.1■□□□□ 0.97
PHKA1P46020 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
PHKA1P46020 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.1■□□□□ 0.97
PHKA1P46020 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHKA1P46020 OR7E47P-204ENST00000575924 449 ntBASIC21.1■□□□□ 0.97
PHKA1P46020 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.1■□□□□ 0.97
PHKA1P46020 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
PHKA1P46020 GPALPP1-207ENST00000611650 899 ntBASIC21.1■□□□□ 0.97
PHKA1P46020 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.1■□□□□ 0.97
PHKA1P46020 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PHKA1P46020 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PHKA1P46020 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHKA1P46020 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PHKA1P46020 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.1■□□□□ 0.97
PHKA1P46020 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHKA1P46020 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHKA1P46020 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.1■□□□□ 0.97
PHKA1P46020 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PHKA1P46020 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.09■□□□□ 0.97
PHKA1P46020 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.09■□□□□ 0.97
PHKA1P46020 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHKA1P46020 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PHKA1P46020 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.09■□□□□ 0.97
PHKA1P46020 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHKA1P46020 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.09■□□□□ 0.97
PHKA1P46020 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PHKA1P46020 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.09■□□□□ 0.97
PHKA1P46020 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PHKA1P46020 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.09■□□□□ 0.97
PHKA1P46020 AC023274.1-201ENST00000418278 595 ntBASIC21.09■□□□□ 0.97
PHKA1P46020 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.09■□□□□ 0.97
PHKA1P46020 VN2R19P-201ENST00000442399 1052 ntBASIC21.09■□□□□ 0.97
PHKA1P46020 HCG4B-203ENST00000450128 991 ntBASIC21.09■□□□□ 0.97
PHKA1P46020 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PHKA1P46020 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHKA1P46020 AC139530.3-201ENST00000620344 690 ntBASIC21.09■□□□□ 0.97
PHKA1P46020 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PHKA1P46020 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHKA1P46020 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PHKA1P46020 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHKA1P46020 AC134043.2-201ENST00000624206 2238 ntBASIC21.09■□□□□ 0.97
PHKA1P46020 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms