Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.65■□□□□ 0.58
SSR1P43307 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.65■□□□□ 0.58
SSR1P43307 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SSR1P43307 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.65■□□□□ 0.58
SSR1P43307 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SSR1P43307 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.65■□□□□ 0.58
SSR1P43307 MIR662-201ENST00000384847 95 ntBASIC18.65■□□□□ 0.58
SSR1P43307 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.65■□□□□ 0.58
SSR1P43307 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.65■□□□□ 0.58
SSR1P43307 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.65■□□□□ 0.58
SSR1P43307 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.65■□□□□ 0.58
SSR1P43307 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.65■□□□□ 0.58
SSR1P43307 AC005332.3-201ENST00000589904 676 ntBASIC18.65■□□□□ 0.58
SSR1P43307 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.65■□□□□ 0.58
SSR1P43307 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SSR1P43307 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SSR1P43307 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.65■□□□□ 0.58
SSR1P43307 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.65■□□□□ 0.58
SSR1P43307 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SSR1P43307 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SSR1P43307 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
SSR1P43307 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SSR1P43307 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSR1P43307 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SSR1P43307 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.64■□□□□ 0.58
SSR1P43307 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SSR1P43307 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
SSR1P43307 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.64■□□□□ 0.58
SSR1P43307 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SSR1P43307 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.64■□□□□ 0.57
SSR1P43307 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 AC108860.2-201ENST00000562760 2183 ntBASIC18.64■□□□□ 0.57
SSR1P43307 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SSR1P43307 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.64■□□□□ 0.57
SSR1P43307 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.64■□□□□ 0.57
SSR1P43307 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SSR1P43307 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.64■□□□□ 0.57
SSR1P43307 RN7SL850P-201ENST00000579959 291 ntBASIC18.64■□□□□ 0.57
SSR1P43307 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.64■□□□□ 0.57
SSR1P43307 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.64■□□□□ 0.57
SSR1P43307 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SSR1P43307 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.64■□□□□ 0.57
SSR1P43307 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SSR1P43307 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SSR1P43307 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 AC008894.3-201ENST00000624324 3103 ntBASIC18.64■□□□□ 0.57
SSR1P43307 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.64■□□□□ 0.57
SSR1P43307 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.64■□□□□ 0.57
SSR1P43307 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSR1P43307 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.63■□□□□ 0.57
SSR1P43307 AL023806.1-201ENST00000603994 1649 ntBASIC18.63■□□□□ 0.57
SSR1P43307 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.63■□□□□ 0.57
SSR1P43307 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.63■□□□□ 0.57
SSR1P43307 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SSR1P43307 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 LINC00304-203ENST00000565008 1864 ntBASIC18.63■□□□□ 0.57
SSR1P43307 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.63■□□□□ 0.57
SSR1P43307 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.63■□□□□ 0.57
SSR1P43307 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.63■□□□□ 0.57
SSR1P43307 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.63■□□□□ 0.57
SSR1P43307 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.63■□□□□ 0.57
SSR1P43307 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.63■□□□□ 0.57
SSR1P43307 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms