Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCNFP41002 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNFP41002 KRT18P35-201ENST00000510488 1269 ntBASIC17.62■□□□□ 0.41
CCNFP41002 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.62■□□□□ 0.41
CCNFP41002 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.62■□□□□ 0.41
CCNFP41002 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.62■□□□□ 0.41
CCNFP41002 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.62■□□□□ 0.41
CCNFP41002 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.62■□□□□ 0.41
CCNFP41002 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.62■□□□□ 0.41
CCNFP41002 AC005332.3-201ENST00000589904 676 ntBASIC17.62■□□□□ 0.41
CCNFP41002 AC004263.2-201ENST00000617183 678 ntBASIC17.62■□□□□ 0.41
CCNFP41002 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNFP41002 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCNFP41002 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.62■□□□□ 0.41
CCNFP41002 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNFP41002 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNFP41002 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCNFP41002 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CCNFP41002 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNFP41002 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNFP41002 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNFP41002 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCNFP41002 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.61■□□□□ 0.41
CCNFP41002 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCNFP41002 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.61■□□□□ 0.41
CCNFP41002 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.61■□□□□ 0.41
CCNFP41002 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.61■□□□□ 0.41
CCNFP41002 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCNFP41002 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.61■□□□□ 0.41
CCNFP41002 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.61■□□□□ 0.41
CCNFP41002 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.61■□□□□ 0.41
CCNFP41002 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CCNFP41002 AL390719.2-201ENST00000606993 987 ntBASIC17.61■□□□□ 0.41
CCNFP41002 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CCNFP41002 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.61■□□□□ 0.41
CCNFP41002 AL353692.3-201ENST00000407031 1396 ntBASIC17.61■□□□□ 0.41
CCNFP41002 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.61■□□□□ 0.41
CCNFP41002 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.61■□□□□ 0.41
CCNFP41002 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.61■□□□□ 0.41
CCNFP41002 AL596257.1-201ENST00000641463 2694 ntBASIC17.61■□□□□ 0.41
CCNFP41002 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.61■□□□□ 0.41
CCNFP41002 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNFP41002 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.6■□□□□ 0.41
CCNFP41002 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 AL513477.1-201ENST00000602865 2407 ntBASIC17.6■□□□□ 0.41
CCNFP41002 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.6■□□□□ 0.41
CCNFP41002 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CCNFP41002 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCNFP41002 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.6■□□□□ 0.41
CCNFP41002 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.6■□□□□ 0.41
CCNFP41002 TSPY12P-201ENST00000421279 868 ntBASIC17.6■□□□□ 0.41
CCNFP41002 FAM86EP-206ENST00000510506 987 ntBASIC17.6■□□□□ 0.41
CCNFP41002 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
CCNFP41002 AC011498.5-201ENST00000592027 486 ntBASIC17.6■□□□□ 0.41
CCNFP41002 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.6■□□□□ 0.41
CCNFP41002 AC009154.2-201ENST00000621177 724 ntBASIC17.6■□□□□ 0.41
CCNFP41002 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCNFP41002 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 AC005332.1-201ENST00000577698 1310 ntBASIC17.6■□□□□ 0.41
CCNFP41002 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 BX276092.7-203ENST00000637198 1536 ntBASIC17.6■□□□□ 0.41
CCNFP41002 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCNFP41002 Z83836.1-201ENST00000624605 1642 ntBASIC17.6■□□□□ 0.41
CCNFP41002 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms