Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 GMPPA-214ENST00000635609 569 ntTSL 511.63□□□□□ -0.558e-10■■■□□ 15.5
GTF2F1P35269 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.789e-7■■■□□ 15.5
GTF2F1P35269 NCOA4-202ENST00000579039 2211 ntTSL 2 BASIC12.59□□□□□ -0.392e-6■■■□□ 15.5
GTF2F1P35269 NCOA4-203ENST00000580070 1755 ntTSL 2 BASIC12.54□□□□□ -0.42e-6■■■□□ 15.5
GTF2F1P35269 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC8.97□□□□□ -0.972e-6■■■□□ 15.5
GTF2F1P35269 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -12e-6■■■□□ 15.5
GTF2F1P35269 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC8□□□□□ -1.132e-6■■■□□ 15.5
GTF2F1P35269 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC15.97■□□□□ 0.154e-9■■■□□ 15.5
GTF2F1P35269 AC005381.1-201ENST00000593065 769 ntTSL 3 BASIC12.72□□□□□ -0.374e-9■■■□□ 15.5
GTF2F1P35269 AC005394.1-201ENST00000589999 1269 ntTSL 1 (best) BASIC10.56□□□□□ -0.724e-9■■■□□ 15.5
GTF2F1P35269 TRMT2A-217ENST00000488335 379 ntTSL 318.53■□□□□ 0.561e-7■■■□□ 15.5
GTF2F1P35269 SLC17A9-203ENST00000411611 565 ntTSL 215.41■□□□□ 0.067e-8■■■□□ 15.5
GTF2F1P35269 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22■■□□□ 1.113e-7■■■□□ 15.5
GTF2F1P35269 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.31■■□□□ 13e-7■■■□□ 15.5
GTF2F1P35269 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.95■□□□□ 0.783e-7■■■□□ 15.5
GTF2F1P35269 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.763e-7■■■□□ 15.5
GTF2F1P35269 DNM1-204ENST00000441149 3286 ntTSL 1 (best)18.92■□□□□ 0.623e-7■■■□□ 15.5
GTF2F1P35269 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.593e-7■■■□□ 15.5
GTF2F1P35269 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.53e-7■■■□□ 15.5
GTF2F1P35269 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.463e-7■■■□□ 15.5
GTF2F1P35269 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.233e-7■■■□□ 15.5
GTF2F1P35269 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.073e-7■■■□□ 15.5
GTF2F1P35269 DNM1-227ENST00000637999 1429 ntTSL 513.43□□□□□ -0.263e-7■■■□□ 15.5
GTF2F1P35269 DNM1-207ENST00000482638 672 ntTSL 510.1□□□□□ -0.793e-7■■■□□ 15.5
GTF2F1P35269 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.52e-6■■■□□ 15.5
GTF2F1P35269 MARK4-203ENST00000587566 553 ntTSL 516.39■□□□□ 0.212e-6■■■□□ 15.5
GTF2F1P35269 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.654e-10■■■□□ 15.5
GTF2F1P35269 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.452e-7■■■□□ 15.5
GTF2F1P35269 THEM7P-201ENST00000419556 672 ntBASIC7.63□□□□□ -1.192e-23■■■□□ 15.5
GTF2F1P35269 MARCH6-211ENST00000512449 832 ntTSL 517.83■□□□□ 0.443e-10■■■□□ 15.5
GTF2F1P35269 MARCH6-208ENST00000510792 1963 ntTSL 2 BASIC13.68□□□□□ -0.223e-10■■■□□ 15.5
GTF2F1P35269 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC11.66□□□□□ -0.543e-10■■■□□ 15.5
GTF2F1P35269 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC10.55□□□□□ -0.723e-10■■■□□ 15.5
GTF2F1P35269 MARCH6-210ENST00000511802 4734 ntTSL 28.22□□□□□ -1.093e-10■■■□□ 15.5
GTF2F1P35269 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.133e-10■■■□□ 15.5
GTF2F1P35269 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.941e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-223ENST00000471679 435 ntTSL 425.39■■□□□ 1.661e-7■■■□□ 15.5
GTF2F1P35269 ACSS2-205ENST00000467019 504 ntTSL 424.27■■□□□ 1.481e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-206ENST00000466482 540 ntTSL 424.26■■□□□ 1.471e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-203ENST00000414318 2088 ntTSL 524.15■■□□□ 1.461e-7■■■□□ 15.5
GTF2F1P35269 ACSS2-211ENST00000477932 2450 ntTSL 523.95■■□□□ 1.421e-7■■■□□ 15.5
GTF2F1P35269 ACSS2-213ENST00000480978 844 ntTSL 223.74■■□□□ 1.391e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-227ENST00000485432 566 ntTSL 422.62■■□□□ 1.211e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-226ENST00000497008 564 ntTSL 422.48■■□□□ 1.191e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-204ENST00000462152 1102 ntTSL 222.4■■□□□ 1.181e-7■■■□□ 15.5
GTF2F1P35269 SFXN5-214ENST00000482289 895 ntTSL 1 (best)22.25■■□□□ 1.151e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-227ENST00000497621 2109 ntTSL 1 (best)21.87■■□□□ 1.091e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-203ENST00000460774 582 ntTSL 321.06■□□□□ 0.961e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-221ENST00000452492 581 ntTSL 320.55■□□□□ 0.881e-7■■■□□ 15.5
GTF2F1P35269 ACSS2-210ENST00000476922 1527 ntTSL 220.53■□□□□ 0.881e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.871e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-213ENST00000480133 360 ntTSL 420.11■□□□□ 0.811e-7■■■□□ 15.5
GTF2F1P35269 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.07■□□□□ 0.81e-7■■■□□ 15.5
GTF2F1P35269 SFXN5-221ENST00000495208 808 ntTSL 1 (best)19.07■□□□□ 0.641e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-219ENST00000489112 804 ntTSL 318.84■□□□□ 0.611e-7■■■□□ 15.5
GTF2F1P35269 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.591e-7■■■□□ 15.5
GTF2F1P35269 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.98■□□□□ 0.471e-7■■■□□ 15.5
GTF2F1P35269 SFXN5-220ENST00000490056 906 ntTSL 1 (best)17.96■□□□□ 0.471e-7■■■□□ 15.5
GTF2F1P35269 ERGIC1-209ENST00000520642 539 ntTSL 417.37■□□□□ 0.371e-7■■■□□ 15.5
GTF2F1P35269 SFXN5-203ENST00000411783 915 ntTSL 317.23■□□□□ 0.351e-7■■■□□ 15.5
GTF2F1P35269 ERGIC1-207ENST00000520326 647 ntTSL 516.23■□□□□ 0.191e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-208ENST00000469105 2837 ntTSL 1 (best)15.86■□□□□ 0.131e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-206ENST00000423331 588 ntTSL 415.2■□□□□ 0.021e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-217ENST00000486249 3148 ntTSL 215.15■□□□□ 0.021e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC14.84□□□□□ -0.031e-7■■■□□ 15.5
GTF2F1P35269 ACSS2-215ENST00000481971 570 ntTSL 414.83□□□□□ -0.041e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-216ENST00000444471 680 ntTSL 314.75□□□□□ -0.051e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-226ENST00000481396 609 ntTSL 414.75□□□□□ -0.051e-7■■■□□ 15.5
GTF2F1P35269 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC14.71□□□□□ -0.051e-7■■■□□ 15.5
GTF2F1P35269 NEK6-212ENST00000539416 2582 ntTSL 2 BASIC14.56□□□□□ -0.081e-7■■■□□ 15.5
GTF2F1P35269 ACSS2-209ENST00000475459 558 ntTSL 414.38□□□□□ -0.111e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-218ENST00000445294 623 ntTSL 214.31□□□□□ -0.121e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.131e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-207ENST00000425944 591 ntTSL 414.23□□□□□ -0.131e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-204ENST00000414349 687 ntTSL 313.66□□□□□ -0.221e-7■■■□□ 15.5
GTF2F1P35269 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC13.58□□□□□ -0.231e-7■■■□□ 15.5
GTF2F1P35269 SFXN5-211ENST00000474528 4072 ntTSL 1 (best)12.95□□□□□ -0.341e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-201ENST00000265261 3362 ntTSL 2 BASIC12.82□□□□□ -0.361e-7■■■□□ 15.5
GTF2F1P35269 SFXN5-207ENST00000461352 3578 ntTSL 1 (best)12.66□□□□□ -0.381e-7■■■□□ 15.5
GTF2F1P35269 SFXN5-202ENST00000410065 840 ntTSL 1 (best) BASIC12.43□□□□□ -0.421e-7■■■□□ 15.5
GTF2F1P35269 ACSS2-206ENST00000468550 547 ntTSL 512.05□□□□□ -0.481e-7■■■□□ 15.5
GTF2F1P35269 SFXN5-201ENST00000272433 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.481e-7■■■□□ 15.5
GTF2F1P35269 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.491e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-202ENST00000412981 592 ntTSL 311.81□□□□□ -0.521e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-215ENST00000443499 681 ntTSL 511.81□□□□□ -0.521e-7■■■□□ 15.5
GTF2F1P35269 ACSS2-217ENST00000488172 648 ntTSL 411.78□□□□□ -0.521e-7■■■□□ 15.5
GTF2F1P35269 ACSS2-214ENST00000481284 2851 ntTSL 211.55□□□□□ -0.561e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-208ENST00000428355 757 ntTSL 311.39□□□□□ -0.591e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-211ENST00000430169 492 ntTSL 311.1□□□□□ -0.631e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-229ENST00000497531 672 ntTSL 310.85□□□□□ -0.671e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-205ENST00000415814 852 ntTSL 310.19□□□□□ -0.781e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-220ENST00000446863 557 ntTSL 410.15□□□□□ -0.781e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.861e-7■■■□□ 15.5
GTF2F1P35269 AC245884.10-201ENST00000597355 337 ntBASIC8.14□□□□□ -1.111e-7■■■□□ 15.5
GTF2F1P35269 ACSS2-204ENST00000464399 358 ntTSL 57.79□□□□□ -1.161e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-214ENST00000443386 561 ntTSL 46.95□□□□□ -1.31e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-217ENST00000444756 545 ntTSL 46.95□□□□□ -1.31e-7■■■□□ 15.5
GTF2F1P35269 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.31e-7■■■□□ 15.5
GTF2F1P35269 SMAD3-209ENST00000558894 797 ntTSL 56.28□□□□□ -1.41e-7■■■□□ 15.5
GTF2F1P35269 ST3GAL6-205ENST00000465004 314 ntTSL 26.23□□□□□ -1.411e-7■■■□□ 15.5
Retrieved 100 of 18,214 protein–RNA pairs in 97.2 ms