Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A4P31645 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A4P31645 AL135999.2-201ENST00000622438 1686 ntBASIC17.93■□□□□ 0.46
SLC6A4P31645 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A4P31645 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A4P31645 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
SLC6A4P31645 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A4P31645 AC006504.4-201ENST00000592118 1568 ntBASIC17.93■□□□□ 0.46
SLC6A4P31645 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A4P31645 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A4P31645 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A4P31645 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A4P31645 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC6A4P31645 ELK2BP-201ENST00000415014 1224 ntBASIC17.93■□□□□ 0.46
SLC6A4P31645 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC6A4P31645 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A4P31645 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC6A4P31645 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A4P31645 RPL13AP23-201ENST00000480739 586 ntBASIC17.93■□□□□ 0.46
SLC6A4P31645 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC6A4P31645 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A4P31645 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC6A4P31645 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A4P31645 AC006557.2-201ENST00000592985 1240 ntBASIC17.93■□□□□ 0.46
SLC6A4P31645 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A4P31645 AL356488.2-201ENST00000602755 427 ntBASIC17.93■□□□□ 0.46
SLC6A4P31645 AL671883.3-201ENST00000603274 991 ntBASIC17.93■□□□□ 0.46
SLC6A4P31645 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A4P31645 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC6A4P31645 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC6A4P31645 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A4P31645 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
SLC6A4P31645 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A4P31645 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC6A4P31645 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A4P31645 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A4P31645 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A4P31645 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A4P31645 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A4P31645 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A4P31645 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
SLC6A4P31645 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC6A4P31645 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC6A4P31645 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC6A4P31645 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC6A4P31645 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC6A4P31645 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SLC6A4P31645 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC6A4P31645 LINC00982-205ENST00000420957 435 ntBASIC17.92■□□□□ 0.46
SLC6A4P31645 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC6A4P31645 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC6A4P31645 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC6A4P31645 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC6A4P31645 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC6A4P31645 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SLC6A4P31645 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC6A4P31645 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC6A4P31645 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A4P31645 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC6A4P31645 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A4P31645 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
SLC6A4P31645 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A4P31645 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A4P31645 GNAS-203ENST00000306120 1878 ntBASIC17.91■□□□□ 0.46
SLC6A4P31645 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A4P31645 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A4P31645 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A4P31645 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A4P31645 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC6A4P31645 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC6A4P31645 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC6A4P31645 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A4P31645 RNA5SP415-201ENST00000517246 115 ntBASIC17.91■□□□□ 0.46
SLC6A4P31645 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC6A4P31645 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A4P31645 AL139424.1-201ENST00000607572 797 ntBASIC17.91■□□□□ 0.46
SLC6A4P31645 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC6A4P31645 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
SLC6A4P31645 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A4P31645 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SLC6A4P31645 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A4P31645 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A4P31645 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC6A4P31645 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC6A4P31645 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A4P31645 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms