Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.83■□□□□ 0.6
CASQ1P31415 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASQ1P31415 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.83■□□□□ 0.6
CASQ1P31415 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.83■□□□□ 0.6
CASQ1P31415 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.83■□□□□ 0.6
CASQ1P31415 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
CASQ1P31415 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.83■□□□□ 0.6
CASQ1P31415 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.83■□□□□ 0.6
CASQ1P31415 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
CASQ1P31415 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASQ1P31415 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASQ1P31415 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASQ1P31415 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.83■□□□□ 0.6
CASQ1P31415 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CASQ1P31415 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CASQ1P31415 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASQ1P31415 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CASQ1P31415 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.82■□□□□ 0.6
CASQ1P31415 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.82■□□□□ 0.6
CASQ1P31415 RNA5SP413-201ENST00000516373 109 ntBASIC18.82■□□□□ 0.6
CASQ1P31415 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CASQ1P31415 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.82■□□□□ 0.6
CASQ1P31415 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CASQ1P31415 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.82■□□□□ 0.6
CASQ1P31415 CR769767.2-201ENST00000622735 460 ntBASIC18.82■□□□□ 0.6
CASQ1P31415 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.82■□□□□ 0.6
CASQ1P31415 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.82■□□□□ 0.6
CASQ1P31415 LINC02012-201ENST00000608206 1725 ntBASIC18.82■□□□□ 0.6
CASQ1P31415 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CASQ1P31415 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CASQ1P31415 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.82■□□□□ 0.6
CASQ1P31415 AC092171.3-201ENST00000610122 2651 ntBASIC18.82■□□□□ 0.6
CASQ1P31415 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.82■□□□□ 0.6
CASQ1P31415 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.82■□□□□ 0.6
CASQ1P31415 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASQ1P31415 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.82■□□□□ 0.6
CASQ1P31415 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.82■□□□□ 0.6
CASQ1P31415 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.82■□□□□ 0.6
CASQ1P31415 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.81■□□□□ 0.6
CASQ1P31415 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.81■□□□□ 0.6
CASQ1P31415 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.81■□□□□ 0.6
CASQ1P31415 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CASQ1P31415 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.81■□□□□ 0.6
CASQ1P31415 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.81■□□□□ 0.6
CASQ1P31415 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.81■□□□□ 0.6
CASQ1P31415 AC008687.5-201ENST00000593746 558 ntBASIC18.81■□□□□ 0.6
CASQ1P31415 DGCR10-201ENST00000609839 495 ntBASIC18.81■□□□□ 0.6
CASQ1P31415 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CASQ1P31415 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.81■□□□□ 0.6
CASQ1P31415 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 AC092068.3-201ENST00000587894 2016 ntBASIC18.81■□□□□ 0.6
CASQ1P31415 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASQ1P31415 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CASQ1P31415 AC078925.2-201ENST00000624013 1973 ntBASIC18.81■□□□□ 0.6
CASQ1P31415 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CASQ1P31415 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CASQ1P31415 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.8■□□□□ 0.6
CASQ1P31415 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASQ1P31415 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASQ1P31415 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.8■□□□□ 0.6
CASQ1P31415 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASQ1P31415 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CASQ1P31415 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASQ1P31415 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASQ1P31415 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASQ1P31415 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASQ1P31415 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASQ1P31415 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASQ1P31415 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASQ1P31415 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms