Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GDF1P27539 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GDF1P27539 AC243591.1-201ENST00000452967 1364 ntBASIC15.88■□□□□ 0.13
GDF1P27539 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
GDF1P27539 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GDF1P27539 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GDF1P27539 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GDF1P27539 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.88■□□□□ 0.13
GDF1P27539 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GDF1P27539 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.88■□□□□ 0.13
GDF1P27539 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GDF1P27539 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.88■□□□□ 0.13
GDF1P27539 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GDF1P27539 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
GDF1P27539 AC148477.5-201ENST00000625164 1645 ntBASIC15.88■□□□□ 0.13
GDF1P27539 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.88■□□□□ 0.13
GDF1P27539 LAGE3P1-201ENST00000425356 484 ntBASIC15.88■□□□□ 0.13
GDF1P27539 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.88■□□□□ 0.13
GDF1P27539 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GDF1P27539 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.88■□□□□ 0.13
GDF1P27539 STK25P1-201ENST00000585406 838 ntBASIC15.88■□□□□ 0.13
GDF1P27539 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.88■□□□□ 0.13
GDF1P27539 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
GDF1P27539 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.88■□□□□ 0.13
GDF1P27539 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.88■□□□□ 0.13
GDF1P27539 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GDF1P27539 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
GDF1P27539 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GDF1P27539 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.88■□□□□ 0.13
GDF1P27539 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.88■□□□□ 0.13
GDF1P27539 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.88■□□□□ 0.13
GDF1P27539 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GDF1P27539 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
GDF1P27539 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
GDF1P27539 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.87■□□□□ 0.13
GDF1P27539 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 AC012317.2-201ENST00000623305 2251 ntBASIC15.87■□□□□ 0.13
GDF1P27539 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.87■□□□□ 0.13
GDF1P27539 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.87■□□□□ 0.13
GDF1P27539 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.87■□□□□ 0.13
GDF1P27539 AC092910.1-201ENST00000482027 1129 ntBASIC15.87■□□□□ 0.13
GDF1P27539 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.87■□□□□ 0.13
GDF1P27539 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.87■□□□□ 0.13
GDF1P27539 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.87■□□□□ 0.13
GDF1P27539 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.87■□□□□ 0.13
GDF1P27539 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.87■□□□□ 0.13
GDF1P27539 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.87■□□□□ 0.13
GDF1P27539 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.87■□□□□ 0.13
GDF1P27539 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.87■□□□□ 0.13
GDF1P27539 AC008735.5-201ENST00000623544 497 ntBASIC15.87■□□□□ 0.13
GDF1P27539 AC116407.3-201ENST00000623905 1129 ntBASIC15.87■□□□□ 0.13
GDF1P27539 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
GDF1P27539 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.87■□□□□ 0.13
GDF1P27539 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDF1P27539 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GDF1P27539 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDF1P27539 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.86■□□□□ 0.13
GDF1P27539 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDF1P27539 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GDF1P27539 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDF1P27539 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDF1P27539 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.86■□□□□ 0.13
GDF1P27539 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDF1P27539 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
GDF1P27539 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.86■□□□□ 0.13
GDF1P27539 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.86■□□□□ 0.13
GDF1P27539 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.86■□□□□ 0.13
GDF1P27539 AC005104.2-201ENST00000427818 678 ntBASIC15.86■□□□□ 0.13
GDF1P27539 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
GDF1P27539 AP000347.1-202ENST00000435868 847 ntBASIC15.86■□□□□ 0.13
GDF1P27539 PRYP5-201ENST00000451909 266 ntBASIC15.86■□□□□ 0.13
GDF1P27539 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.86■□□□□ 0.13
GDF1P27539 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.86■□□□□ 0.13
GDF1P27539 AC105339.3-201ENST00000560043 636 ntBASIC15.86■□□□□ 0.13
GDF1P27539 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
GDF1P27539 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDF1P27539 REXO1L11P-201ENST00000620964 1927 ntBASIC15.86■□□□□ 0.13
GDF1P27539 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GDF1P27539 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.86■□□□□ 0.13
GDF1P27539 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
GDF1P27539 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms