Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.97■□□□□ 0.31
LAMA1P25391 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 AC006116.8-202ENST00000587620 1550 ntBASIC16.97■□□□□ 0.31
LAMA1P25391 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LAMA1P25391 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LAMA1P25391 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LAMA1P25391 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.97■□□□□ 0.31
LAMA1P25391 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.97■□□□□ 0.31
LAMA1P25391 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 GPS2P2-201ENST00000430745 888 ntBASIC16.97■□□□□ 0.31
LAMA1P25391 AL008721.1-201ENST00000609964 604 ntBASIC16.97■□□□□ 0.31
LAMA1P25391 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.97■□□□□ 0.31
LAMA1P25391 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.97■□□□□ 0.31
LAMA1P25391 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.97■□□□□ 0.31
LAMA1P25391 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.97■□□□□ 0.31
LAMA1P25391 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.97■□□□□ 0.31
LAMA1P25391 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LAMA1P25391 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.97■□□□□ 0.31
LAMA1P25391 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.96■□□□□ 0.31
LAMA1P25391 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 AC009336.1-201ENST00000608941 1553 ntBASIC16.96■□□□□ 0.31
LAMA1P25391 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LAMA1P25391 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LAMA1P25391 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
LAMA1P25391 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.96■□□□□ 0.31
LAMA1P25391 KLF2P3-201ENST00000451977 1087 ntBASIC16.96■□□□□ 0.31
LAMA1P25391 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.96■□□□□ 0.31
LAMA1P25391 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.96■□□□□ 0.31
LAMA1P25391 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.96■□□□□ 0.31
LAMA1P25391 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.96■□□□□ 0.31
LAMA1P25391 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LAMA1P25391 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.96■□□□□ 0.31
LAMA1P25391 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LAMA1P25391 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.96■□□□□ 0.31
LAMA1P25391 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.96■□□□□ 0.31
LAMA1P25391 CNN2P2-201ENST00000443536 909 ntBASIC16.96■□□□□ 0.31
LAMA1P25391 CNN2P3-201ENST00000450201 906 ntBASIC16.96■□□□□ 0.31
LAMA1P25391 AC069335.1-201ENST00000489972 472 ntBASIC16.96■□□□□ 0.31
LAMA1P25391 SERBP1P5-201ENST00000510079 1181 ntBASIC16.96■□□□□ 0.31
LAMA1P25391 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.96■□□□□ 0.31
LAMA1P25391 AL136317.3-201ENST00000618497 906 ntBASIC16.96■□□□□ 0.31
LAMA1P25391 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.96■□□□□ 0.31
LAMA1P25391 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.96■□□□□ 0.31
LAMA1P25391 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LAMA1P25391 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
LAMA1P25391 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.96■□□□□ 0.3
LAMA1P25391 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
LAMA1P25391 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.96■□□□□ 0.3
LAMA1P25391 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LAMA1P25391 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.95■□□□□ 0.3
LAMA1P25391 LINC00982-205ENST00000420957 435 ntBASIC16.95■□□□□ 0.3
LAMA1P25391 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.95■□□□□ 0.3
LAMA1P25391 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LAMA1P25391 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.95■□□□□ 0.3
LAMA1P25391 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.95■□□□□ 0.3
LAMA1P25391 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.95■□□□□ 0.3
LAMA1P25391 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.95■□□□□ 0.3
LAMA1P25391 AC109462.3-201ENST00000573934 613 ntBASIC16.95■□□□□ 0.3
LAMA1P25391 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.95■□□□□ 0.3
LAMA1P25391 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.95■□□□□ 0.3
LAMA1P25391 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.95■□□□□ 0.3
LAMA1P25391 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LAMA1P25391 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.95■□□□□ 0.3
LAMA1P25391 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LAMA1P25391 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.95■□□□□ 0.3
LAMA1P25391 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LAMA1P25391 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LAMA1P25391 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.95■□□□□ 0.3
LAMA1P25391 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.95■□□□□ 0.3
LAMA1P25391 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LAMA1P25391 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LAMA1P25391 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.95■□□□□ 0.3
LAMA1P25391 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms