Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 PAM-217ENST00000509523 539 ntTSL 417.96■□□□□ 0.471e-7■■■□□ 16.1
RPS3P23396 PAM-219ENST00000509832 564 ntTSL 417.96■□□□□ 0.471e-7■■■□□ 16.1
RPS3P23396 UXS1-214ENST00000483426 541 ntTSL 417.79■□□□□ 0.441e-7■■■□□ 16.1
RPS3P23396 EVA1A-211ENST00000490746 589 ntTSL 517.02■□□□□ 0.321e-7■■■□□ 16.1
RPS3P23396 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.291e-7■■■□□ 16.1
RPS3P23396 PAM-213ENST00000506006 616 ntTSL 416.53■□□□□ 0.241e-7■■■□□ 16.1
RPS3P23396 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.241e-7■■■□□ 16.1
RPS3P23396 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.94■□□□□ 0.141e-7■■■□□ 16.1
RPS3P23396 EVA1A-208ENST00000485891 479 ntTSL 515.85■□□□□ 0.131e-7■■■□□ 16.1
RPS3P23396 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.091e-7■■■□□ 16.1
RPS3P23396 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.081e-7■■■□□ 16.1
RPS3P23396 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.081e-7■■■□□ 16.1
RPS3P23396 EVA1A-206ENST00000432649 569 ntAPPRIS ALT2 TSL 315.55■□□□□ 0.081e-7■■■□□ 16.1
RPS3P23396 ICMT-203ENST00000489498 2612 ntTSL 1 (best)15.5■□□□□ 0.071e-7■■■□□ 16.1
RPS3P23396 SLCO2B1-216ENST00000531756 1720 ntTSL 215.06■□□□□ 01e-7■■■□□ 16.1
RPS3P23396 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.89□□□□□ -0.031e-7■■■□□ 16.1
RPS3P23396 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.091e-7■■■□□ 16.1
RPS3P23396 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.131e-7■■■□□ 16.1
RPS3P23396 SLCO2B1-207ENST00000526660 582 ntTSL 314.05□□□□□ -0.161e-7■■■□□ 16.1
RPS3P23396 LIPC-207ENST00000560664 815 ntTSL 313.68□□□□□ -0.221e-7■■■□□ 16.1
RPS3P23396 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.231e-7■■■□□ 16.1
RPS3P23396 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.261e-7■■■□□ 16.1
RPS3P23396 ARSA-207ENST00000608497 576 ntTSL 313.42□□□□□ -0.261e-7■■■□□ 16.1
RPS3P23396 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.31e-7■■■□□ 16.1
RPS3P23396 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.321e-7■■■□□ 16.1
RPS3P23396 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.331e-7■■■□□ 16.1
RPS3P23396 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.63□□□□□ -0.391e-7■■■□□ 16.1
RPS3P23396 LIPC-205ENST00000559845 1530 ntTSL 1 (best)12.62□□□□□ -0.391e-7■■■□□ 16.1
RPS3P23396 TUBB3-207ENST00000554927 561 ntTSL 212.56□□□□□ -0.41e-7■■■□□ 16.1
RPS3P23396 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC12.45□□□□□ -0.421e-7■■■□□ 16.1
RPS3P23396 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC12.35□□□□□ -0.431e-7■■■□□ 16.1
RPS3P23396 SLCO2B1-214ENST00000531457 588 ntTSL 212.2□□□□□ -0.461e-7■■■□□ 16.1
RPS3P23396 PAM-202ENST00000345721 3684 ntTSL 212.12□□□□□ -0.471e-7■■■□□ 16.1
RPS3P23396 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC11.97□□□□□ -0.491e-7■■■□□ 16.1
RPS3P23396 TMEM70-206ENST00000520167 479 ntTSL 211.89□□□□□ -0.511e-7■■■□□ 16.1
RPS3P23396 SLCO2B1-204ENST00000454962 3219 ntTSL 2 BASIC11.46□□□□□ -0.571e-7■■■□□ 16.1
RPS3P23396 SMOC1-205ENST00000557483 519 ntTSL 510.32□□□□□ -0.761e-7■■■□□ 16.1
RPS3P23396 PAM-216ENST00000508060 369 ntTSL 410.07□□□□□ -0.81e-7■■■□□ 16.1
RPS3P23396 SLCO2B1-201ENST00000289575 4494 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.851e-7■■■□□ 16.1
RPS3P23396 LIPC-201ENST00000299022 2751 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.871e-7■■■□□ 16.1
RPS3P23396 LIPC-203ENST00000414170 2968 ntTSL 1 (best) BASIC9□□□□□ -0.971e-7■■■□□ 16.1
RPS3P23396 SLCO2B1-215ENST00000531713 578 ntTSL 38.16□□□□□ -1.11e-7■■■□□ 16.1
RPS3P23396 EVA1A-210ENST00000486696 585 ntTSL 36.97□□□□□ -1.291e-7■■■□□ 16.1
RPS3P23396 TMEM45B-203ENST00000525709 247 ntTSL 54.34□□□□□ -1.711e-7■■■□□ 16.1
RPS3P23396 PAM-208ENST00000502472 540 ntTSL 43.35□□□□□ -1.871e-7■■■□□ 16.1
RPS3P23396 QSOX2-202ENST00000455222 851 ntTSL 56.54□□□□□ -1.362e-6■■■□□ 16.1
RPS3P23396 MCM7-206ENST00000465688 481 ntTSL 317.55■□□□□ 0.43e-8■■■□□ 16.1
RPS3P23396 WARS-224ENST00000555464 544 ntTSL 48□□□□□ -1.138e-21■■■□□ 16.1
RPS3P23396 CTSB-207ENST00000524654 368 ntTSL 510.65□□□□□ -0.73e-55■■■□□ 16.1
RPS3P23396 SLC3A2-220ENST00000542922 2174 ntTSL 213.47□□□□□ -0.256e-7■■■□□ 16.1
RPS3P23396 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.113e-18■■■□□ 16.1
RPS3P23396 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.433e-18■■■□□ 16.1
RPS3P23396 RPL35A-202ENST00000429437 442 ntTSL 54.44□□□□□ -1.73e-18■■■□□ 16.1
RPS3P23396 PSMA6-205ENST00000554457 4730 nt6.77□□□□□ -1.338e-18■■■□□ 16.1
RPS3P23396 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC12.43□□□□□ -0.426e-15■■■□□ 16.1
RPS3P23396 BUD23-211ENST00000442099 691 ntTSL 311.64□□□□□ -0.552e-6■■■□□ 16.1
RPS3P23396 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.116e-7■■■□□ 16.1
RPS3P23396 YIPF3-208ENST00000490447 1321 ntTSL 216.98■□□□□ 0.318e-8■■■□□ 16.1
RPS3P23396 YIPF3-214ENST00000510102 1639 ntTSL 516.59■□□□□ 0.258e-8■■■□□ 16.1
RPS3P23396 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.038e-8■■■□□ 16.1
RPS3P23396 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.15□□□□□ -0.148e-8■■■□□ 16.1
RPS3P23396 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.4■□□□□ 0.225e-8■■■□□ 16.1
RPS3P23396 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.065e-8■■■□□ 16.1
RPS3P23396 WARS-229ENST00000556435 528 ntTSL 212.11□□□□□ -0.472e-9■■■□□ 16.1
RPS3P23396 WARS-240ENST00000557297 821 ntTSL 36.38□□□□□ -1.392e-9■■■□□ 16.1
RPS3P23396 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.178e-7■■■□□ 16.1
RPS3P23396 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.56e-7■■■□□ 16.1
RPS3P23396 P3H1-207ENST00000460031 2726 ntTSL 516.64■□□□□ 0.256e-7■■■□□ 16.1
RPS3P23396 P3H1-214ENST00000495874 2813 ntTSL 215.6■□□□□ 0.096e-7■■■□□ 16.1
RPS3P23396 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.066e-7■■■□□ 16.1
RPS3P23396 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 06e-7■■■□□ 16.1
RPS3P23396 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.751e-7■■■□□ 16.1
RPS3P23396 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.81□□□□□ -2.121e-7■■■□□ 16.1
RPS3P23396 MRPL42-207ENST00000551396 725 ntTSL 51.61□□□□□ -2.151e-7■■■□□ 16.1
RPS3P23396 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.38□□□□□ -2.191e-7■■■□□ 16.1
RPS3P23396 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.36□□□□□ -2.191e-7■■■□□ 16.1
RPS3P23396 MRPL42-201ENST00000358678 2105 ntTSL 1 (best)1.36□□□□□ -2.191e-7■■■□□ 16.1
RPS3P23396 MRPL42-209ENST00000552326 567 ntTSL 41.31□□□□□ -2.21e-7■■■□□ 16.1
RPS3P23396 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.369e-10■■■□□ 16.1
RPS3P23396 HAX1-211ENST00000532105 771 ntTSL 3 BASIC12.37□□□□□ -0.439e-10■■■□□ 16.1
RPS3P23396 HAX1-202ENST00000435087 822 ntTSL 312.37□□□□□ -0.439e-10■■■□□ 16.1
RPS3P23396 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC11.79□□□□□ -0.529e-10■■■□□ 16.1
RPS3P23396 HAX1-203ENST00000447768 842 ntTSL 59.95□□□□□ -0.829e-10■■■□□ 16.1
RPS3P23396 HAX1-210ENST00000531435 1284 ntTSL 29.91□□□□□ -0.829e-10■■■□□ 16.1
RPS3P23396 HAX1-207ENST00000477780 1089 ntTSL 29.91□□□□□ -0.829e-10■■■□□ 16.1
RPS3P23396 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.48□□□□□ -1.699e-10■■■□□ 16.1
RPS3P23396 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.182e-8■■■□□ 16.1
RPS3P23396 SLC3A2-219ENST00000542793 539 ntTSL 28.06□□□□□ -1.121e-7■■■□□ 16.1
RPS3P23396 POLD1-202ENST00000593407 867 ntTSL 518.76■□□□□ 0.598e-11■■■□□ 16
RPS3P23396 POLD1-208ENST00000596648 1048 ntTSL 518.06■□□□□ 0.488e-11■■■□□ 16
RPS3P23396 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.81■□□□□ 0.281e-7■■■□□ 16
RPS3P23396 TRIP6-205ENST00000463125 835 ntTSL 216.69■□□□□ 0.268e-11■■■□□ 16
RPS3P23396 TRIP6-203ENST00000429658 646 ntTSL 315.12■□□□□ 0.018e-11■■■□□ 16
RPS3P23396 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.011e-7■■■□□ 16
RPS3P23396 DYNC1H1-205ENST00000555102 561 ntTSL 414.8□□□□□ -0.042e-13■■■□□ 16
RPS3P23396 RBM14-RBM4-204ENST00000511114 523 ntTSL 412.06□□□□□ -0.481e-7■■■□□ 16
RPS3P23396 XPO5-206ENST00000455285 758 ntTSL 310.68□□□□□ -0.78e-11■■■□□ 16
RPS3P23396 XPO5-209ENST00000488195 868 ntTSL 48.68□□□□□ -1.028e-11■■■□□ 16
RPS3P23396 XPO5-207ENST00000455854 3629 ntTSL 28.37□□□□□ -1.078e-11■■■□□ 16
RPS3P23396 XPO5-208ENST00000486936 601 ntTSL 37.92□□□□□ -1.148e-11■■■□□ 16
Retrieved 100 of 24,271 protein–RNA pairs in 276.6 ms