Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 KLF4P1-201ENST00000412782 1185 ntBASIC17.67■□□□□ 0.42
XPAP23025 KRT18P67-201ENST00000432816 1264 ntBASIC17.67■□□□□ 0.42
XPAP23025 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.67■□□□□ 0.42
XPAP23025 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.67■□□□□ 0.42
XPAP23025 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
XPAP23025 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.67■□□□□ 0.42
XPAP23025 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.67■□□□□ 0.42
XPAP23025 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.67■□□□□ 0.42
XPAP23025 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.67■□□□□ 0.42
XPAP23025 AL773604.1-201ENST00000617417 272 ntBASIC17.67■□□□□ 0.42
XPAP23025 AD001527.2-201ENST00000622994 785 ntBASIC17.67■□□□□ 0.42
XPAP23025 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XPAP23025 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
XPAP23025 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
XPAP23025 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
XPAP23025 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
XPAP23025 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
XPAP23025 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
XPAP23025 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
XPAP23025 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.67■□□□□ 0.42
XPAP23025 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 PMPCAP1-201ENST00000508114 1576 ntBASIC17.66■□□□□ 0.42
XPAP23025 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
XPAP23025 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
XPAP23025 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.66■□□□□ 0.42
XPAP23025 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 MYCLP1-201ENST00000372451 1075 ntBASIC17.66■□□□□ 0.42
XPAP23025 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.66■□□□□ 0.42
XPAP23025 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.66■□□□□ 0.42
XPAP23025 AC093909.1-201ENST00000504731 1122 ntBASIC17.66■□□□□ 0.42
XPAP23025 RNPS1P1-201ENST00000507437 918 ntBASIC17.66■□□□□ 0.42
XPAP23025 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.66■□□□□ 0.42
XPAP23025 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.66■□□□□ 0.42
XPAP23025 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.66■□□□□ 0.42
XPAP23025 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.66■□□□□ 0.42
XPAP23025 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.66■□□□□ 0.42
XPAP23025 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.66■□□□□ 0.42
XPAP23025 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
XPAP23025 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.66■□□□□ 0.42
XPAP23025 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XPAP23025 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XPAP23025 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.65■□□□□ 0.42
XPAP23025 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XPAP23025 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.65■□□□□ 0.42
XPAP23025 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
XPAP23025 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XPAP23025 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.65■□□□□ 0.42
XPAP23025 RPS2P28-201ENST00000314255 741 ntBASIC17.65■□□□□ 0.42
XPAP23025 AC003669.1-201ENST00000334569 611 ntBASIC17.65■□□□□ 0.42
XPAP23025 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XPAP23025 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.65■□□□□ 0.42
XPAP23025 FDX1P1-201ENST00000449115 551 ntBASIC17.65■□□□□ 0.42
XPAP23025 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.65■□□□□ 0.42
XPAP23025 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
XPAP23025 BX005266.1-201ENST00000473402 457 ntBASIC17.65■□□□□ 0.42
XPAP23025 AC002558.1-201ENST00000488906 803 ntBASIC17.65■□□□□ 0.42
XPAP23025 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.65■□□□□ 0.42
XPAP23025 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.65■□□□□ 0.42
XPAP23025 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.65■□□□□ 0.42
XPAP23025 SART3-203ENST00000546611 1184 ntBASIC17.65■□□□□ 0.42
XPAP23025 NKAPP1-205ENST00000585790 367 ntBASIC17.65■□□□□ 0.42
XPAP23025 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
XPAP23025 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.65■□□□□ 0.42
XPAP23025 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XPAP23025 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.65■□□□□ 0.42
XPAP23025 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.65■□□□□ 0.42
XPAP23025 AL049757.1-201ENST00000616842 1596 ntBASIC17.65■□□□□ 0.42
XPAP23025 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XPAP23025 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XPAP23025 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
XPAP23025 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
XPAP23025 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.64■□□□□ 0.42
XPAP23025 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
XPAP23025 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
XPAP23025 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
XPAP23025 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.64■□□□□ 0.41
XPAP23025 AL353593.2-201ENST00000602529 1483 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms