Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.39■□□□□ 0.53
MMP8P22894 AC093525.9-201ENST00000624961 1746 ntBASIC18.39■□□□□ 0.53
MMP8P22894 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP8P22894 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP8P22894 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP8P22894 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP8P22894 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP8P22894 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP8P22894 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.39■□□□□ 0.53
MMP8P22894 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP8P22894 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP8P22894 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP8P22894 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP8P22894 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MMP8P22894 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.38■□□□□ 0.53
MMP8P22894 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MMP8P22894 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MMP8P22894 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.38■□□□□ 0.53
MMP8P22894 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 KLF4P1-201ENST00000412782 1185 ntBASIC18.38■□□□□ 0.53
MMP8P22894 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP8P22894 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.38■□□□□ 0.53
MMP8P22894 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.38■□□□□ 0.53
MMP8P22894 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.38■□□□□ 0.53
MMP8P22894 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP8P22894 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
MMP8P22894 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 AL135999.2-201ENST00000622438 1686 ntBASIC18.38■□□□□ 0.53
MMP8P22894 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP8P22894 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
MMP8P22894 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
MMP8P22894 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP8P22894 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.37■□□□□ 0.53
MMP8P22894 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
MMP8P22894 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.37■□□□□ 0.53
MMP8P22894 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
MMP8P22894 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.37■□□□□ 0.53
MMP8P22894 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.37■□□□□ 0.53
MMP8P22894 NUS1P2-201ENST00000417358 873 ntBASIC18.37■□□□□ 0.53
MMP8P22894 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.37■□□□□ 0.53
MMP8P22894 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.37■□□□□ 0.53
MMP8P22894 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MMP8P22894 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MMP8P22894 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MMP8P22894 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP8P22894 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.37■□□□□ 0.53
MMP8P22894 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
MMP8P22894 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP8P22894 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP8P22894 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.36■□□□□ 0.53
MMP8P22894 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP8P22894 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MMP8P22894 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
MMP8P22894 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.36■□□□□ 0.53
MMP8P22894 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
MMP8P22894 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP8P22894 ABCD1P5-201ENST00000445663 754 ntBASIC18.36■□□□□ 0.53
MMP8P22894 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MMP8P22894 KRT16P4-201ENST00000453883 522 ntBASIC18.36■□□□□ 0.53
MMP8P22894 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP8P22894 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms