Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ACANP16112 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACANP16112 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACANP16112 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACANP16112 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
ACANP16112 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.2□□□□□ -0.14
ACANP16112 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.2□□□□□ -0.14
ACANP16112 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.2□□□□□ -0.14
ACANP16112 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACANP16112 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.2□□□□□ -0.14
ACANP16112 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACANP16112 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.2□□□□□ -0.14
ACANP16112 AC106886.1-201ENST00000568660 600 ntBASIC14.2□□□□□ -0.14
ACANP16112 STK25P1-201ENST00000585406 838 ntBASIC14.2□□□□□ -0.14
ACANP16112 AL138828.2-201ENST00000615812 383 ntBASIC14.2□□□□□ -0.14
ACANP16112 AL162274.1-201ENST00000617191 1098 ntBASIC14.2□□□□□ -0.14
ACANP16112 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ACANP16112 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.19□□□□□ -0.14
ACANP16112 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ACANP16112 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ACANP16112 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.19□□□□□ -0.14
ACANP16112 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.19□□□□□ -0.14
ACANP16112 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ACANP16112 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.19□□□□□ -0.14
ACANP16112 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.19□□□□□ -0.14
ACANP16112 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.19□□□□□ -0.14
ACANP16112 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.19□□□□□ -0.14
ACANP16112 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.19□□□□□ -0.14
ACANP16112 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ACANP16112 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.19□□□□□ -0.14
ACANP16112 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ACANP16112 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.19□□□□□ -0.14
ACANP16112 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
ACANP16112 RN7SL589P-201ENST00000481268 310 ntBASIC14.19□□□□□ -0.14
ACANP16112 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.19□□□□□ -0.14
ACANP16112 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.19□□□□□ -0.14
ACANP16112 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACANP16112 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.18□□□□□ -0.14
ACANP16112 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.18□□□□□ -0.14
ACANP16112 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ACANP16112 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.18□□□□□ -0.14
ACANP16112 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
ACANP16112 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.18□□□□□ -0.14
ACANP16112 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
ACANP16112 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 SPDYE7P-202ENST00000420373 878 ntBASIC14.18□□□□□ -0.14
ACANP16112 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 KRT17P7-201ENST00000451704 1104 ntBASIC14.18□□□□□ -0.14
ACANP16112 AL513480.1-201ENST00000451731 511 ntBASIC14.18□□□□□ -0.14
ACANP16112 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.18□□□□□ -0.14
ACANP16112 RARRES2P8-201ENST00000566335 367 ntBASIC14.18□□□□□ -0.14
ACANP16112 MIR4453-201ENST00000584019 89 ntBASIC14.18□□□□□ -0.14
ACANP16112 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.18□□□□□ -0.14
ACANP16112 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.18□□□□□ -0.14
ACANP16112 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.18□□□□□ -0.14
ACANP16112 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.18□□□□□ -0.14
ACANP16112 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.18□□□□□ -0.14
ACANP16112 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.18□□□□□ -0.14
ACANP16112 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.18□□□□□ -0.14
ACANP16112 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
ACANP16112 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ACANP16112 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms