Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2AFXP16104 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2AFXP16104 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2AFXP16104 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.17■□□□□ 0.5
H2AFXP16104 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.17■□□□□ 0.5
H2AFXP16104 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.17■□□□□ 0.5
H2AFXP16104 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
H2AFXP16104 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.17■□□□□ 0.5
H2AFXP16104 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.17■□□□□ 0.5
H2AFXP16104 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.17■□□□□ 0.5
H2AFXP16104 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
H2AFXP16104 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.17■□□□□ 0.5
H2AFXP16104 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.17■□□□□ 0.5
H2AFXP16104 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.17■□□□□ 0.5
H2AFXP16104 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
H2AFXP16104 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.17■□□□□ 0.5
H2AFXP16104 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
H2AFXP16104 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.17■□□□□ 0.5
H2AFXP16104 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.17■□□□□ 0.5
H2AFXP16104 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
H2AFXP16104 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.17■□□□□ 0.5
H2AFXP16104 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.17■□□□□ 0.5
H2AFXP16104 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.17■□□□□ 0.5
H2AFXP16104 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFXP16104 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.17■□□□□ 0.5
H2AFXP16104 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
H2AFXP16104 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.16■□□□□ 0.5
H2AFXP16104 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.16■□□□□ 0.5
H2AFXP16104 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
H2AFXP16104 NIFKP9-201ENST00000419265 221 ntBASIC18.16■□□□□ 0.5
H2AFXP16104 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.16■□□□□ 0.5
H2AFXP16104 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.16■□□□□ 0.5
H2AFXP16104 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
H2AFXP16104 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
H2AFXP16104 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.16■□□□□ 0.5
H2AFXP16104 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
H2AFXP16104 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
H2AFXP16104 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFXP16104 AC006058.4-201ENST00000624016 1670 ntBASIC18.15■□□□□ 0.5
H2AFXP16104 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.15■□□□□ 0.5
H2AFXP16104 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2AFXP16104 AC013268.4-201ENST00000637413 2228 ntBASIC18.15■□□□□ 0.5
H2AFXP16104 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2AFXP16104 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2AFXP16104 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2AFXP16104 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
H2AFXP16104 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2AFXP16104 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.15■□□□□ 0.5
H2AFXP16104 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2AFXP16104 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2AFXP16104 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2AFXP16104 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
H2AFXP16104 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2AFXP16104 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2AFXP16104 FAM207BP-201ENST00000447172 505 ntBASIC18.15■□□□□ 0.5
H2AFXP16104 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.15■□□□□ 0.5
H2AFXP16104 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.15■□□□□ 0.5
H2AFXP16104 MIR3180-4-201ENST00000582223 153 ntBASIC18.15■□□□□ 0.5
H2AFXP16104 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms