Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
PTPRFP10586 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.86■□□□□ 0.77
PTPRFP10586 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 AC002056.1-201ENST00000395613 760 ntBASIC19.86■□□□□ 0.77
PTPRFP10586 FAM185BP-201ENST00000443595 716 ntBASIC19.86■□□□□ 0.77
PTPRFP10586 RN7SL589P-201ENST00000481268 310 ntBASIC19.86■□□□□ 0.77
PTPRFP10586 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.86■□□□□ 0.77
PTPRFP10586 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.86■□□□□ 0.77
PTPRFP10586 AC025678.2-201ENST00000562061 970 ntBASIC19.86■□□□□ 0.77
PTPRFP10586 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
PTPRFP10586 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PTPRFP10586 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
PTPRFP10586 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PTPRFP10586 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPRFP10586 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
PTPRFP10586 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPRFP10586 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PTPRFP10586 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 AC087641.1-201ENST00000557561 1021 ntBASIC19.86■□□□□ 0.77
PTPRFP10586 AL645728.2-201ENST00000641974 660 ntBASIC19.86■□□□□ 0.77
PTPRFP10586 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPRFP10586 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PTPRFP10586 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPRFP10586 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.86■□□□□ 0.77
PTPRFP10586 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
PTPRFP10586 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPRFP10586 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPRFP10586 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPRFP10586 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PTPRFP10586 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPRFP10586 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPRFP10586 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPRFP10586 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPRFP10586 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PTPRFP10586 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPRFP10586 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPRFP10586 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPRFP10586 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPRFP10586 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPRFP10586 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPRFP10586 AC079140.1-201ENST00000508039 487 ntBASIC19.85■□□□□ 0.77
PTPRFP10586 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.85■□□□□ 0.77
PTPRFP10586 AC239800.4-201ENST00000603712 296 ntBASIC19.85■□□□□ 0.77
PTPRFP10586 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PTPRFP10586 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPRFP10586 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPRFP10586 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPRFP10586 AC098818.2-201ENST00000564925 2320 ntBASIC19.85■□□□□ 0.77
PTPRFP10586 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
PTPRFP10586 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPRFP10586 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPRFP10586 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPRFP10586 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPRFP10586 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPRFP10586 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPRFP10586 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPRFP10586 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.84■□□□□ 0.77
PTPRFP10586 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.84■□□□□ 0.77
PTPRFP10586 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPRFP10586 AL592309.1-201ENST00000443127 649 ntBASIC19.84■□□□□ 0.77
PTPRFP10586 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPRFP10586 AC140878.1-201ENST00000565277 250 ntBASIC19.84■□□□□ 0.77
PTPRFP10586 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPRFP10586 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PTPRFP10586 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPRFP10586 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPRFP10586 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
PTPRFP10586 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPRFP10586 AC090164.3-201ENST00000610780 2143 ntBASIC19.84■□□□□ 0.77
PTPRFP10586 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPRFP10586 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPRFP10586 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PTPRFP10586 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPRFP10586 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.84■□□□□ 0.77
PTPRFP10586 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPRFP10586 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.84■□□□□ 0.77
PTPRFP10586 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPRFP10586 LINC01451-201ENST00000623792 534 ntBASIC19.84■□□□□ 0.77
PTPRFP10586 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.84■□□□□ 0.77
PTPRFP10586 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPRFP10586 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPRFP10586 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPRFP10586 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPRFP10586 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
PTPRFP10586 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PTPRFP10586 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPRFP10586 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPRFP10586 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms