Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
UBCP0CG48 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.39■□□□□ 0.05
UBCP0CG48 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
UBCP0CG48 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
UBCP0CG48 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UBCP0CG48 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
UBCP0CG48 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.38■□□□□ 0.05
UBCP0CG48 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
UBCP0CG48 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UBCP0CG48 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.38■□□□□ 0.05
UBCP0CG48 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UBCP0CG48 COX11P1-201ENST00000489116 835 ntBASIC15.38■□□□□ 0.05
UBCP0CG48 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.38■□□□□ 0.05
UBCP0CG48 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.38■□□□□ 0.05
UBCP0CG48 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
UBCP0CG48 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
UBCP0CG48 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UBCP0CG48 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.38■□□□□ 0.05
UBCP0CG48 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
UBCP0CG48 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.38■□□□□ 0.05
UBCP0CG48 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBCP0CG48 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.38■□□□□ 0.05
UBCP0CG48 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.38■□□□□ 0.05
UBCP0CG48 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.37■□□□□ 0.05
UBCP0CG48 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
UBCP0CG48 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.37■□□□□ 0.05
UBCP0CG48 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.37■□□□□ 0.05
UBCP0CG48 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
UBCP0CG48 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
UBCP0CG48 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 STARP1-201ENST00000397973 869 ntBASIC15.37■□□□□ 0.05
UBCP0CG48 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.37■□□□□ 0.05
UBCP0CG48 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.37■□□□□ 0.05
UBCP0CG48 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.37■□□□□ 0.05
UBCP0CG48 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.37■□□□□ 0.05
UBCP0CG48 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
UBCP0CG48 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
UBCP0CG48 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.37■□□□□ 0.05
UBCP0CG48 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBCP0CG48 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
UBCP0CG48 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.36■□□□□ 0.05
UBCP0CG48 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
UBCP0CG48 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.36■□□□□ 0.05
UBCP0CG48 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
UBCP0CG48 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 IGHGP-201ENST00000390555 1178 ntBASIC15.36■□□□□ 0.05
UBCP0CG48 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.36■□□□□ 0.05
UBCP0CG48 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
UBCP0CG48 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.36■□□□□ 0.05
UBCP0CG48 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.36■□□□□ 0.05
UBCP0CG48 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
UBCP0CG48 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms