Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.89■□□□□ 0.13
FREM3P0C091 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 MIR574-201ENST00000385209 96 ntBASIC15.89■□□□□ 0.13
FREM3P0C091 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
FREM3P0C091 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
FREM3P0C091 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.89■□□□□ 0.13
FREM3P0C091 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 KRT18P55-202ENST00000578578 1546 ntBASIC15.89■□□□□ 0.13
FREM3P0C091 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.89■□□□□ 0.13
FREM3P0C091 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
FREM3P0C091 AC139713.2-201ENST00000641328 2723 ntBASIC15.88■□□□□ 0.13
FREM3P0C091 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
FREM3P0C091 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.88■□□□□ 0.13
FREM3P0C091 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.88■□□□□ 0.13
FREM3P0C091 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
FREM3P0C091 KRT18P58-201ENST00000527480 1120 ntBASIC15.88■□□□□ 0.13
FREM3P0C091 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.88■□□□□ 0.13
FREM3P0C091 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.88■□□□□ 0.13
FREM3P0C091 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.88■□□□□ 0.13
FREM3P0C091 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
FREM3P0C091 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.88■□□□□ 0.13
FREM3P0C091 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
FREM3P0C091 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
FREM3P0C091 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.88■□□□□ 0.13
FREM3P0C091 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.88■□□□□ 0.13
FREM3P0C091 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FREM3P0C091 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.88■□□□□ 0.13
FREM3P0C091 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FREM3P0C091 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FREM3P0C091 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
FREM3P0C091 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FREM3P0C091 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
FREM3P0C091 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
FREM3P0C091 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
FREM3P0C091 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.87■□□□□ 0.13
FREM3P0C091 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
FREM3P0C091 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.87■□□□□ 0.13
FREM3P0C091 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
FREM3P0C091 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.87■□□□□ 0.13
FREM3P0C091 AC079776.4-201ENST00000511039 504 ntBASIC15.87■□□□□ 0.13
FREM3P0C091 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.87■□□□□ 0.13
FREM3P0C091 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.87■□□□□ 0.13
FREM3P0C091 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FREM3P0C091 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FREM3P0C091 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.87■□□□□ 0.13
FREM3P0C091 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.87■□□□□ 0.13
FREM3P0C091 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.87■□□□□ 0.13
FREM3P0C091 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
FREM3P0C091 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
FREM3P0C091 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.87■□□□□ 0.13
FREM3P0C091 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
FREM3P0C091 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FREM3P0C091 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.87■□□□□ 0.13
FREM3P0C091 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.86■□□□□ 0.13
FREM3P0C091 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.86■□□□□ 0.13
FREM3P0C091 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.86■□□□□ 0.13
FREM3P0C091 STK19B-204ENST00000512515 211 ntBASIC15.86■□□□□ 0.13
FREM3P0C091 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.86■□□□□ 0.13
FREM3P0C091 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.86■□□□□ 0.13
FREM3P0C091 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.86■□□□□ 0.13
FREM3P0C091 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.86■□□□□ 0.13
FREM3P0C091 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
FREM3P0C091 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
FREM3P0C091 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
FREM3P0C091 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms