Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPARCP09486 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SPARCP09486 AC022211.2-201ENST00000585075 2527 ntBASIC15.62■□□□□ 0.09
SPARCP09486 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPARCP09486 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SPARCP09486 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPARCP09486 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPARCP09486 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.62■□□□□ 0.09
SPARCP09486 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPARCP09486 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPARCP09486 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.62■□□□□ 0.09
SPARCP09486 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.62■□□□□ 0.09
SPARCP09486 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SPARCP09486 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SPARCP09486 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
SPARCP09486 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SPARCP09486 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SPARCP09486 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SPARCP09486 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
SPARCP09486 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.61■□□□□ 0.09
SPARCP09486 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
SPARCP09486 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.61■□□□□ 0.09
SPARCP09486 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.61■□□□□ 0.09
SPARCP09486 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.61■□□□□ 0.09
SPARCP09486 AC005332.3-201ENST00000589904 676 ntBASIC15.61■□□□□ 0.09
SPARCP09486 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.61■□□□□ 0.09
SPARCP09486 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.61■□□□□ 0.09
SPARCP09486 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SPARCP09486 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
SPARCP09486 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.61■□□□□ 0.09
SPARCP09486 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.61■□□□□ 0.09
SPARCP09486 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.61■□□□□ 0.09
SPARCP09486 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPARCP09486 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 LINC01311-201ENST00000565162 1445 ntBASIC15.6■□□□□ 0.09
SPARCP09486 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SPARCP09486 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.6■□□□□ 0.09
SPARCP09486 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
SPARCP09486 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 LYSMD4-203ENST00000378904 2122 ntBASIC15.6■□□□□ 0.09
SPARCP09486 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
SPARCP09486 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
SPARCP09486 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.6■□□□□ 0.09
SPARCP09486 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.6■□□□□ 0.09
SPARCP09486 AC006011.2-201ENST00000621313 1158 ntBASIC15.6■□□□□ 0.09
SPARCP09486 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.6■□□□□ 0.09
SPARCP09486 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
SPARCP09486 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SPARCP09486 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SPARCP09486 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.6■□□□□ 0.09
SPARCP09486 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
SPARCP09486 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.6■□□□□ 0.09
SPARCP09486 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SPARCP09486 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPARCP09486 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SPARCP09486 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPARCP09486 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.59■□□□□ 0.09
SPARCP09486 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.59■□□□□ 0.09
SPARCP09486 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.59■□□□□ 0.09
SPARCP09486 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPARCP09486 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms