Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
MMP2P08253 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP2P08253 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MMP2P08253 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP2P08253 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP2P08253 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
MMP2P08253 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP2P08253 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP2P08253 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP2P08253 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
MMP2P08253 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.58■□□□□ 0.4
MMP2P08253 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.58■□□□□ 0.4
MMP2P08253 BX005266.1-201ENST00000473402 457 ntBASIC17.58■□□□□ 0.4
MMP2P08253 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP2P08253 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.58■□□□□ 0.4
MMP2P08253 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MMP2P08253 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MMP2P08253 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.58■□□□□ 0.4
MMP2P08253 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MMP2P08253 NKAPP1-205ENST00000585790 367 ntBASIC17.58■□□□□ 0.4
MMP2P08253 AC008608.2-201ENST00000606089 416 ntBASIC17.58■□□□□ 0.4
MMP2P08253 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
MMP2P08253 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP2P08253 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
MMP2P08253 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP2P08253 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP2P08253 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP2P08253 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MMP2P08253 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP2P08253 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP2P08253 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
MMP2P08253 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.58■□□□□ 0.4
MMP2P08253 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP2P08253 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
MMP2P08253 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP2P08253 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
MMP2P08253 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP2P08253 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.57■□□□□ 0.4
MMP2P08253 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
MMP2P08253 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MMP2P08253 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
MMP2P08253 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP2P08253 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.57■□□□□ 0.4
MMP2P08253 EMBP1-201ENST00000458200 901 ntBASIC17.57■□□□□ 0.4
MMP2P08253 SART3-203ENST00000546611 1184 ntBASIC17.57■□□□□ 0.4
MMP2P08253 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.57■□□□□ 0.4
MMP2P08253 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.57■□□□□ 0.4
MMP2P08253 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.57■□□□□ 0.4
MMP2P08253 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 AP001094.4-201ENST00000579008 2176 ntBASIC17.57■□□□□ 0.4
MMP2P08253 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
MMP2P08253 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP2P08253 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
MMP2P08253 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP2P08253 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.56■□□□□ 0.4
MMP2P08253 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP2P08253 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MMP2P08253 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
MMP2P08253 SIGLEC30P-201ENST00000455569 941 ntBASIC17.56■□□□□ 0.4
MMP2P08253 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.56■□□□□ 0.4
MMP2P08253 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.56■□□□□ 0.4
MMP2P08253 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.56■□□□□ 0.4
MMP2P08253 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.56■□□□□ 0.4
MMP2P08253 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MMP2P08253 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.56■□□□□ 0.4
MMP2P08253 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP2P08253 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP2P08253 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP2P08253 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.56■□□□□ 0.4
MMP2P08253 AL356309.3-201ENST00000624132 1934 ntBASIC17.56■□□□□ 0.4
MMP2P08253 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
MMP2P08253 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.56■□□□□ 0.4
MMP2P08253 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.55■□□□□ 0.4
MMP2P08253 AC093525.9-201ENST00000624961 1746 ntBASIC17.55■□□□□ 0.4
MMP2P08253 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP2P08253 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP2P08253 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
MMP2P08253 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.55■□□□□ 0.4
MMP2P08253 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP2P08253 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP2P08253 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.55■□□□□ 0.4
MMP2P08253 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms