Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRAP04437 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TCRAP04437 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRAP04437 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRAP04437 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.35□□□□□ -0.27
TCRAP04437 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRAP04437 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TCRAP04437 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TCRAP04437 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.34□□□□□ -0.27
TCRAP04437 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TCRAP04437 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TCRAP04437 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 AC046185.3-201ENST00000623228 1824 ntBASIC13.34□□□□□ -0.27
TCRAP04437 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRAP04437 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRAP04437 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TCRAP04437 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TCRAP04437 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TCRAP04437 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 UNC93B2-201ENST00000285383 730 ntBASIC13.34□□□□□ -0.27
TCRAP04437 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.34□□□□□ -0.27
TCRAP04437 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TCRAP04437 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.34□□□□□ -0.27
TCRAP04437 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.34□□□□□ -0.27
TCRAP04437 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRAP04437 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.34□□□□□ -0.27
TCRAP04437 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.34□□□□□ -0.27
TCRAP04437 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRAP04437 AL049637.2-201ENST00000641778 930 ntBASIC13.34□□□□□ -0.27
TCRAP04437 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.34□□□□□ -0.27
TCRAP04437 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TCRAP04437 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.34□□□□□ -0.27
TCRAP04437 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TCRAP04437 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.34□□□□□ -0.27
TCRAP04437 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TCRAP04437 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TCRAP04437 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TCRAP04437 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
TCRAP04437 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TCRAP04437 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.33□□□□□ -0.27
TCRAP04437 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.33□□□□□ -0.27
TCRAP04437 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TCRAP04437 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
TCRAP04437 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TCRAP04437 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
TCRAP04437 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.33□□□□□ -0.28
TCRAP04437 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TCRAP04437 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.33□□□□□ -0.28
TCRAP04437 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TCRAP04437 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.33□□□□□ -0.28
TCRAP04437 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.33□□□□□ -0.28
TCRAP04437 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 MIR4651-201ENST00000582622 73 ntBASIC13.33□□□□□ -0.28
TCRAP04437 AC233702.5-201ENST00000584107 538 ntBASIC13.33□□□□□ -0.28
TCRAP04437 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.33□□□□□ -0.28
TCRAP04437 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.33□□□□□ -0.28
TCRAP04437 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.33□□□□□ -0.28
TCRAP04437 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.33□□□□□ -0.28
TCRAP04437 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
TCRAP04437 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms