Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CD74P04233 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CD74P04233 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD74P04233 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD74P04233 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD74P04233 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.73□□□□□ -0.05
CD74P04233 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CD74P04233 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.73□□□□□ -0.05
CD74P04233 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD74P04233 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CD74P04233 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD74P04233 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD74P04233 LINC00554-201ENST00000564841 3011 ntBASIC14.73□□□□□ -0.05
CD74P04233 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CD74P04233 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD74P04233 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CD74P04233 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD74P04233 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CD74P04233 PVRIG2P-201ENST00000435460 978 ntBASIC14.73□□□□□ -0.05
CD74P04233 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.73□□□□□ -0.05
CD74P04233 RPPH1-201ENST00000516869 333 ntBASIC14.73□□□□□ -0.05
CD74P04233 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD74P04233 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.73□□□□□ -0.05
CD74P04233 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD74P04233 AC006058.3-201ENST00000606217 1069 ntBASIC14.73□□□□□ -0.05
CD74P04233 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.73□□□□□ -0.05
CD74P04233 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CD74P04233 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CD74P04233 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CD74P04233 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CD74P04233 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CD74P04233 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CD74P04233 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD74P04233 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD74P04233 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD74P04233 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD74P04233 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CD74P04233 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CD74P04233 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
CD74P04233 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.72□□□□□ -0.05
CD74P04233 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.72□□□□□ -0.05
CD74P04233 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CD74P04233 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.72□□□□□ -0.05
CD74P04233 BX088651.1-201ENST00000540551 451 ntBASIC14.72□□□□□ -0.05
CD74P04233 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.72□□□□□ -0.05
CD74P04233 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CD74P04233 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.72□□□□□ -0.05
CD74P04233 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.72□□□□□ -0.05
CD74P04233 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.72□□□□□ -0.05
CD74P04233 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD74P04233 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.71□□□□□ -0.05
CD74P04233 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD74P04233 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.71□□□□□ -0.05
CD74P04233 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD74P04233 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD74P04233 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CD74P04233 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD74P04233 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD74P04233 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.71□□□□□ -0.05
CD74P04233 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CD74P04233 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
CD74P04233 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CD74P04233 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
CD74P04233 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CD74P04233 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.71□□□□□ -0.05
CD74P04233 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD74P04233 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD74P04233 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
CD74P04233 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.71□□□□□ -0.05
CD74P04233 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.71□□□□□ -0.05
CD74P04233 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD74P04233 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.71□□□□□ -0.05
CD74P04233 MIR3917-201ENST00000580971 93 ntBASIC14.71□□□□□ -0.05
CD74P04233 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.71□□□□□ -0.05
CD74P04233 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.71□□□□□ -0.05
CD74P04233 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CD74P04233 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD74P04233 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD74P04233 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.71□□□□□ -0.06
CD74P04233 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.71□□□□□ -0.06
CD74P04233 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms