Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.33■□□□□ 0.04
LCATP04180 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.33■□□□□ 0.04
LCATP04180 AL023806.1-201ENST00000603994 1649 ntBASIC15.33■□□□□ 0.04
LCATP04180 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.33■□□□□ 0.04
LCATP04180 CHCHD2P8-201ENST00000429873 447 ntBASIC15.33■□□□□ 0.04
LCATP04180 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.33■□□□□ 0.04
LCATP04180 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
LCATP04180 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.33■□□□□ 0.04
LCATP04180 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.33■□□□□ 0.04
LCATP04180 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.33■□□□□ 0.04
LCATP04180 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LCATP04180 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 IER3-202ENST00000376377 1350 ntBASIC15.33■□□□□ 0.04
LCATP04180 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LCATP04180 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCATP04180 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
LCATP04180 AC010460.3-201ENST00000511359 1579 ntBASIC15.32■□□□□ 0.04
LCATP04180 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.32■□□□□ 0.04
LCATP04180 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LCATP04180 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LCATP04180 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LCATP04180 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.32■□□□□ 0.04
LCATP04180 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LCATP04180 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.32■□□□□ 0.04
LCATP04180 AC116407.4-201ENST00000623319 1061 ntBASIC15.32■□□□□ 0.04
LCATP04180 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LCATP04180 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LCATP04180 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LCATP04180 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.32■□□□□ 0.04
LCATP04180 AC016734.2-201ENST00000624325 1377 ntBASIC15.32■□□□□ 0.04
LCATP04180 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.32■□□□□ 0.04
LCATP04180 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.32■□□□□ 0.04
LCATP04180 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.32■□□□□ 0.04
LCATP04180 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.32■□□□□ 0.04
LCATP04180 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCATP04180 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.31■□□□□ 0.04
LCATP04180 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.31■□□□□ 0.04
LCATP04180 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.31■□□□□ 0.04
LCATP04180 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LCATP04180 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LCATP04180 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 COX5BP2-201ENST00000392354 334 ntBASIC15.31■□□□□ 0.04
LCATP04180 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.31■□□□□ 0.04
LCATP04180 TSSC2-201ENST00000450217 709 ntBASIC15.31■□□□□ 0.04
LCATP04180 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.31■□□□□ 0.04
LCATP04180 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.31■□□□□ 0.04
LCATP04180 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCATP04180 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms