Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.8■□□□□ 0.76
ALDH1A1P00352 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ALDH1A1P00352 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ALDH1A1P00352 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ALDH1A1P00352 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.8■□□□□ 0.76
ALDH1A1P00352 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALDH1A1P00352 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ALDH1A1P00352 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.79■□□□□ 0.76
ALDH1A1P00352 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
ALDH1A1P00352 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.79■□□□□ 0.76
ALDH1A1P00352 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
ALDH1A1P00352 ARSEP1-201ENST00000420443 635 ntBASIC19.79■□□□□ 0.76
ALDH1A1P00352 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.79■□□□□ 0.76
ALDH1A1P00352 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.79■□□□□ 0.76
ALDH1A1P00352 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.79■□□□□ 0.76
ALDH1A1P00352 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.79■□□□□ 0.76
ALDH1A1P00352 AC004233.3-201ENST00000607794 1269 ntBASIC19.79■□□□□ 0.76
ALDH1A1P00352 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.79■□□□□ 0.76
ALDH1A1P00352 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
ALDH1A1P00352 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.79■□□□□ 0.76
ALDH1A1P00352 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ALDH1A1P00352 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALDH1A1P00352 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.78■□□□□ 0.76
ALDH1A1P00352 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ALDH1A1P00352 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.78■□□□□ 0.76
ALDH1A1P00352 AC005332.7-201ENST00000614046 2005 ntBASIC19.78■□□□□ 0.76
ALDH1A1P00352 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALDH1A1P00352 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ALDH1A1P00352 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ALDH1A1P00352 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALDH1A1P00352 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.78■□□□□ 0.76
ALDH1A1P00352 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.78■□□□□ 0.76
ALDH1A1P00352 ALG1L8P-201ENST00000533887 760 ntBASIC19.78■□□□□ 0.76
ALDH1A1P00352 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.78■□□□□ 0.76
ALDH1A1P00352 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.78■□□□□ 0.76
ALDH1A1P00352 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.78■□□□□ 0.76
ALDH1A1P00352 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALDH1A1P00352 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ALDH1A1P00352 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALDH1A1P00352 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALDH1A1P00352 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.78■□□□□ 0.76
ALDH1A1P00352 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALDH1A1P00352 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.77■□□□□ 0.76
ALDH1A1P00352 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALDH1A1P00352 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ALDH1A1P00352 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.77■□□□□ 0.76
ALDH1A1P00352 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
ALDH1A1P00352 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ALDH1A1P00352 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.77■□□□□ 0.76
ALDH1A1P00352 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.77■□□□□ 0.76
ALDH1A1P00352 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.77■□□□□ 0.76
ALDH1A1P00352 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALDH1A1P00352 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.77■□□□□ 0.76
ALDH1A1P00352 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.77■□□□□ 0.76
ALDH1A1P00352 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ALDH1A1P00352 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.77■□□□□ 0.76
ALDH1A1P00352 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ALDH1A1P00352 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.77■□□□□ 0.76
ALDH1A1P00352 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
ALDH1A1P00352 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.77■□□□□ 0.75
ALDH1A1P00352 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
ALDH1A1P00352 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALDH1A1P00352 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.76■□□□□ 0.75
ALDH1A1P00352 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALDH1A1P00352 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ALDH1A1P00352 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ALDH1A1P00352 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.76■□□□□ 0.75
ALDH1A1P00352 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALDH1A1P00352 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALDH1A1P00352 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
ALDH1A1P00352 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALDH1A1P00352 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ALDH1A1P00352 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ALDH1A1P00352 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.76■□□□□ 0.75
ALDH1A1P00352 AC107918.2-201ENST00000530817 355 ntBASIC19.76■□□□□ 0.75
ALDH1A1P00352 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.76■□□□□ 0.75
ALDH1A1P00352 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.76■□□□□ 0.75
ALDH1A1P00352 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.76■□□□□ 0.75
ALDH1A1P00352 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ALDH1A1P00352 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms