Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SOX30O94993 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
SOX30O94993 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX30O94993 POM121L3P-201ENST00000419331 1163 ntBASIC16.32■□□□□ 0.2
SOX30O94993 KRT18P1-202ENST00000452408 1331 ntBASIC16.32■□□□□ 0.2
SOX30O94993 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.32■□□□□ 0.2
SOX30O94993 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SOX30O94993 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX30O94993 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX30O94993 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.32■□□□□ 0.2
SOX30O94993 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.32■□□□□ 0.2
SOX30O94993 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.32■□□□□ 0.2
SOX30O94993 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SOX30O94993 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SOX30O94993 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.32■□□□□ 0.2
SOX30O94993 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX30O94993 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX30O94993 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SOX30O94993 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX30O94993 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX30O94993 PCDHA12-202ENST00000613593 2588 ntBASIC16.32■□□□□ 0.2
SOX30O94993 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SOX30O94993 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
SOX30O94993 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.31■□□□□ 0.2
SOX30O94993 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.31■□□□□ 0.2
SOX30O94993 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.31■□□□□ 0.2
SOX30O94993 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.31■□□□□ 0.2
SOX30O94993 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.31■□□□□ 0.2
SOX30O94993 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.31■□□□□ 0.2
SOX30O94993 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.31■□□□□ 0.2
SOX30O94993 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.31■□□□□ 0.2
SOX30O94993 AC005336.2-201ENST00000593183 939 ntBASIC16.31■□□□□ 0.2
SOX30O94993 AC011467.2-201ENST00000598425 242 ntBASIC16.31■□□□□ 0.2
SOX30O94993 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.31■□□□□ 0.2
SOX30O94993 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.31■□□□□ 0.2
SOX30O94993 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SOX30O94993 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX30O94993 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.3■□□□□ 0.2
SOX30O94993 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SOX30O94993 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.3■□□□□ 0.2
SOX30O94993 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX30O94993 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.3■□□□□ 0.2
SOX30O94993 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX30O94993 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX30O94993 AC233702.3-201ENST00000578656 1387 ntBASIC16.3■□□□□ 0.2
SOX30O94993 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX30O94993 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.3■□□□□ 0.2
SOX30O94993 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
SOX30O94993 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX30O94993 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX30O94993 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SOX30O94993 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.3■□□□□ 0.2
SOX30O94993 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SOX30O94993 AL845331.1-201ENST00000424978 1190 ntBASIC16.3■□□□□ 0.2
SOX30O94993 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX30O94993 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX30O94993 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX30O94993 KRT126P-201ENST00000549467 1181 ntBASIC16.3■□□□□ 0.2
SOX30O94993 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SOX30O94993 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SOX30O94993 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.3■□□□□ 0.2
SOX30O94993 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.3■□□□□ 0.2
SOX30O94993 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.3■□□□□ 0.2
SOX30O94993 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.3■□□□□ 0.2
SOX30O94993 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX30O94993 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.3■□□□□ 0.2
SOX30O94993 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX30O94993 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SOX30O94993 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX30O94993 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX30O94993 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.3■□□□□ 0.2
SOX30O94993 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
SOX30O94993 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX30O94993 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOX30O94993 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX30O94993 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOX30O94993 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.29■□□□□ 0.2
SOX30O94993 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX30O94993 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX30O94993 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SOX30O94993 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.29■□□□□ 0.2
SOX30O94993 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOX30O94993 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX30O94993 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX30O94993 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SOX30O94993 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms