Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GADD45BO75293 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GADD45BO75293 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GADD45BO75293 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GADD45BO75293 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GADD45BO75293 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GADD45BO75293 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.04■□□□□ 0.8
GADD45BO75293 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
GADD45BO75293 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GADD45BO75293 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.03■□□□□ 0.8
GADD45BO75293 KRT17P2-201ENST00000300992 1314 ntBASIC20.03■□□□□ 0.8
GADD45BO75293 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GADD45BO75293 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GADD45BO75293 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GADD45BO75293 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GADD45BO75293 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GADD45BO75293 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.03■□□□□ 0.8
GADD45BO75293 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
GADD45BO75293 MMP23A-201ENST00000234610 1017 ntBASIC20.03■□□□□ 0.8
GADD45BO75293 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.03■□□□□ 0.8
GADD45BO75293 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GADD45BO75293 AP000523.1-201ENST00000398242 1049 ntBASIC20.03■□□□□ 0.8
GADD45BO75293 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GADD45BO75293 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.03■□□□□ 0.8
GADD45BO75293 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.03■□□□□ 0.8
GADD45BO75293 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.03■□□□□ 0.8
GADD45BO75293 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.03■□□□□ 0.8
GADD45BO75293 AL138966.2-201ENST00000621997 464 ntBASIC20.03■□□□□ 0.8
GADD45BO75293 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.03■□□□□ 0.8
GADD45BO75293 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GADD45BO75293 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GADD45BO75293 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
GADD45BO75293 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GADD45BO75293 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GADD45BO75293 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.03■□□□□ 0.8
GADD45BO75293 AL162727.3-201ENST00000635661 2787 ntBASIC20.03■□□□□ 0.8
GADD45BO75293 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.03■□□□□ 0.8
GADD45BO75293 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GADD45BO75293 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GADD45BO75293 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GADD45BO75293 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.02■□□□□ 0.8
GADD45BO75293 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.02■□□□□ 0.8
GADD45BO75293 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.02■□□□□ 0.8
GADD45BO75293 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.02■□□□□ 0.8
GADD45BO75293 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.02■□□□□ 0.8
GADD45BO75293 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
GADD45BO75293 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
GADD45BO75293 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
GADD45BO75293 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
GADD45BO75293 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.02■□□□□ 0.8
GADD45BO75293 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.02■□□□□ 0.8
GADD45BO75293 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.02■□□□□ 0.8
GADD45BO75293 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.02■□□□□ 0.8
GADD45BO75293 AC010460.3-201ENST00000511359 1579 ntBASIC20.02■□□□□ 0.8
GADD45BO75293 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.02■□□□□ 0.8
GADD45BO75293 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.02■□□□□ 0.8
GADD45BO75293 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GADD45BO75293 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
GADD45BO75293 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GADD45BO75293 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
GADD45BO75293 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.02■□□□□ 0.79
GADD45BO75293 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
GADD45BO75293 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.02■□□□□ 0.79
GADD45BO75293 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
GADD45BO75293 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GADD45BO75293 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GADD45BO75293 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GADD45BO75293 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
GADD45BO75293 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GADD45BO75293 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
GADD45BO75293 AC068472.1-201ENST00000474589 881 ntBASIC20.01■□□□□ 0.79
GADD45BO75293 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GADD45BO75293 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GADD45BO75293 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GADD45BO75293 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.01■□□□□ 0.79
GADD45BO75293 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
GADD45BO75293 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
GADD45BO75293 AC006449.5-201ENST00000610658 2098 ntBASIC20.01■□□□□ 0.79
GADD45BO75293 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
GADD45BO75293 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
GADD45BO75293 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.01■□□□□ 0.79
GADD45BO75293 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
GADD45BO75293 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20■□□□□ 0.79
GADD45BO75293 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20■□□□□ 0.79
GADD45BO75293 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms