Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCL13O43927 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CXCL13O43927 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CXCL13O43927 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 AC067852.2-201ENST00000590513 2313 ntBASIC15.67■□□□□ 0.1
CXCL13O43927 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.67■□□□□ 0.1
CXCL13O43927 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.67■□□□□ 0.1
CXCL13O43927 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CXCL13O43927 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CXCL13O43927 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CXCL13O43927 MRPL3P1-201ENST00000400109 1033 ntBASIC15.67■□□□□ 0.1
CXCL13O43927 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.67■□□□□ 0.1
CXCL13O43927 KRT18P67-201ENST00000432816 1264 ntBASIC15.67■□□□□ 0.1
CXCL13O43927 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.67■□□□□ 0.1
CXCL13O43927 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
CXCL13O43927 RNPS1P1-201ENST00000507437 918 ntBASIC15.67■□□□□ 0.1
CXCL13O43927 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CXCL13O43927 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.67■□□□□ 0.1
CXCL13O43927 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.67■□□□□ 0.1
CXCL13O43927 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.67■□□□□ 0.1
CXCL13O43927 AC021087.4-201ENST00000563761 564 ntBASIC15.67■□□□□ 0.1
CXCL13O43927 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.67■□□□□ 0.1
CXCL13O43927 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.67■□□□□ 0.1
CXCL13O43927 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CXCL13O43927 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.67■□□□□ 0.1
CXCL13O43927 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CXCL13O43927 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CXCL13O43927 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CXCL13O43927 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CXCL13O43927 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.67■□□□□ 0.1
CXCL13O43927 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CXCL13O43927 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL13O43927 AC133963.1-201ENST00000504166 1679 ntBASIC15.67■□□□□ 0.1
CXCL13O43927 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CXCL13O43927 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CXCL13O43927 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CXCL13O43927 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.66■□□□□ 0.1
CXCL13O43927 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 AC148477.5-201ENST00000625164 1645 ntBASIC15.66■□□□□ 0.1
CXCL13O43927 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.66■□□□□ 0.1
CXCL13O43927 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CXCL13O43927 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CXCL13O43927 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 MTDHP4-201ENST00000600287 670 ntBASIC15.66■□□□□ 0.1
CXCL13O43927 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.66■□□□□ 0.1
CXCL13O43927 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 AC064862.7-201ENST00000604520 867 ntBASIC15.66■□□□□ 0.1
CXCL13O43927 AC073592.4-201ENST00000623827 446 ntBASIC15.66■□□□□ 0.1
CXCL13O43927 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CXCL13O43927 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CXCL13O43927 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CXCL13O43927 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CXCL13O43927 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 SIGLEC16-201ENST00000599858 1437 ntBASIC15.66■□□□□ 0.1
CXCL13O43927 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL13O43927 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 AC009336.1-201ENST00000608941 1553 ntBASIC15.66■□□□□ 0.1
CXCL13O43927 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CXCL13O43927 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CXCL13O43927 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms