Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
KDELR3O43731 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
KDELR3O43731 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.72■□□□□ 0.43
KDELR3O43731 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KDELR3O43731 AC016396.2-201ENST00000562575 1417 ntBASIC17.72■□□□□ 0.43
KDELR3O43731 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDELR3O43731 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.72■□□□□ 0.43
KDELR3O43731 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KDELR3O43731 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.72■□□□□ 0.43
KDELR3O43731 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDELR3O43731 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDELR3O43731 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDELR3O43731 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
KDELR3O43731 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDELR3O43731 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KDELR3O43731 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.72■□□□□ 0.43
KDELR3O43731 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDELR3O43731 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
KDELR3O43731 RPS2P28-201ENST00000314255 741 ntBASIC17.72■□□□□ 0.43
KDELR3O43731 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDELR3O43731 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KDELR3O43731 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.72■□□□□ 0.43
KDELR3O43731 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.72■□□□□ 0.43
KDELR3O43731 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.72■□□□□ 0.43
KDELR3O43731 AC139887.3-201ENST00000568585 713 ntBASIC17.72■□□□□ 0.43
KDELR3O43731 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.72■□□□□ 0.43
KDELR3O43731 AC107918.4-202ENST00000641623 219 ntBASIC17.72■□□□□ 0.43
KDELR3O43731 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDELR3O43731 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KDELR3O43731 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KDELR3O43731 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.72■□□□□ 0.43
KDELR3O43731 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDELR3O43731 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KDELR3O43731 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDELR3O43731 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDELR3O43731 NCF1C-201ENST00000438382 1427 ntBASIC17.72■□□□□ 0.43
KDELR3O43731 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
KDELR3O43731 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 AC138932.1-201ENST00000534164 6830 ntBASIC17.71■□□□□ 0.43
KDELR3O43731 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.71■□□□□ 0.43
KDELR3O43731 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
KDELR3O43731 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
KDELR3O43731 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.71■□□□□ 0.43
KDELR3O43731 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.71■□□□□ 0.43
KDELR3O43731 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.71■□□□□ 0.43
KDELR3O43731 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 AL031284.1-201ENST00000419297 478 ntBASIC17.71■□□□□ 0.43
KDELR3O43731 LAGE3P1-201ENST00000425356 484 ntBASIC17.71■□□□□ 0.43
KDELR3O43731 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.71■□□□□ 0.43
KDELR3O43731 RNA5SP419-201ENST00000515908 135 ntBASIC17.71■□□□□ 0.43
KDELR3O43731 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.71■□□□□ 0.43
KDELR3O43731 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.71■□□□□ 0.43
KDELR3O43731 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
KDELR3O43731 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.71■□□□□ 0.43
KDELR3O43731 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.71■□□□□ 0.43
KDELR3O43731 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.71■□□□□ 0.43
KDELR3O43731 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.71■□□□□ 0.43
KDELR3O43731 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.71■□□□□ 0.43
KDELR3O43731 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDELR3O43731 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
KDELR3O43731 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
KDELR3O43731 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.7■□□□□ 0.42
KDELR3O43731 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.7■□□□□ 0.42
KDELR3O43731 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDELR3O43731 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDELR3O43731 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDELR3O43731 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KDELR3O43731 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDELR3O43731 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.7■□□□□ 0.42
KDELR3O43731 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDELR3O43731 LINC00982-205ENST00000420957 435 ntBASIC17.7■□□□□ 0.42
KDELR3O43731 ACTG1P4-201ENST00000425123 1122 ntBASIC17.7■□□□□ 0.42
KDELR3O43731 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDELR3O43731 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.7■□□□□ 0.42
KDELR3O43731 FAM215A-202ENST00000632077 792 ntBASIC17.7■□□□□ 0.42
KDELR3O43731 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KDELR3O43731 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.7■□□□□ 0.42
KDELR3O43731 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.7■□□□□ 0.42
KDELR3O43731 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
KDELR3O43731 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
KDELR3O43731 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDELR3O43731 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.7■□□□□ 0.42
KDELR3O43731 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms