Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMAD6O43541 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
SMAD6O43541 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.66■□□□□ 0.42
SMAD6O43541 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD6O43541 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.66■□□□□ 0.42
SMAD6O43541 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.66■□□□□ 0.42
SMAD6O43541 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD6O43541 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.66■□□□□ 0.42
SMAD6O43541 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD6O43541 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 AC006504.4-201ENST00000592118 1568 ntBASIC17.66■□□□□ 0.42
SMAD6O43541 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
SMAD6O43541 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD6O43541 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD6O43541 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD6O43541 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD6O43541 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD6O43541 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD6O43541 NCF1C-201ENST00000438382 1427 ntBASIC17.65■□□□□ 0.42
SMAD6O43541 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.65■□□□□ 0.42
SMAD6O43541 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD6O43541 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.65■□□□□ 0.42
SMAD6O43541 AL135999.2-201ENST00000622438 1686 ntBASIC17.65■□□□□ 0.42
SMAD6O43541 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SMAD6O43541 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD6O43541 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
SMAD6O43541 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.65■□□□□ 0.42
SMAD6O43541 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.65■□□□□ 0.42
SMAD6O43541 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.65■□□□□ 0.42
SMAD6O43541 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SMAD6O43541 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.65■□□□□ 0.42
SMAD6O43541 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.65■□□□□ 0.42
SMAD6O43541 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.65■□□□□ 0.42
SMAD6O43541 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.65■□□□□ 0.42
SMAD6O43541 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.65■□□□□ 0.42
SMAD6O43541 AC006557.2-201ENST00000592985 1240 ntBASIC17.65■□□□□ 0.42
SMAD6O43541 AL356488.2-201ENST00000602755 427 ntBASIC17.65■□□□□ 0.42
SMAD6O43541 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.65■□□□□ 0.42
SMAD6O43541 AC117500.6-201ENST00000624871 588 ntBASIC17.65■□□□□ 0.42
SMAD6O43541 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.65■□□□□ 0.42
SMAD6O43541 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD6O43541 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
SMAD6O43541 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD6O43541 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD6O43541 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD6O43541 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.65■□□□□ 0.42
SMAD6O43541 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMAD6O43541 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.64■□□□□ 0.42
SMAD6O43541 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
SMAD6O43541 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMAD6O43541 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SMAD6O43541 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.42
SMAD6O43541 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.42
SMAD6O43541 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.64■□□□□ 0.41
SMAD6O43541 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD6O43541 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.64■□□□□ 0.41
SMAD6O43541 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.64■□□□□ 0.41
SMAD6O43541 LINC00982-205ENST00000420957 435 ntBASIC17.64■□□□□ 0.41
SMAD6O43541 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.64■□□□□ 0.41
SMAD6O43541 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.64■□□□□ 0.41
SMAD6O43541 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.64■□□□□ 0.41
SMAD6O43541 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD6O43541 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.64■□□□□ 0.41
SMAD6O43541 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.64■□□□□ 0.41
SMAD6O43541 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD6O43541 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.64■□□□□ 0.41
SMAD6O43541 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD6O43541 AL671883.3-201ENST00000603274 991 ntBASIC17.64■□□□□ 0.41
SMAD6O43541 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD6O43541 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD6O43541 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD6O43541 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.64■□□□□ 0.41
SMAD6O43541 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD6O43541 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD6O43541 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD6O43541 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.64■□□□□ 0.41
SMAD6O43541 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD6O43541 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.64■□□□□ 0.41
SMAD6O43541 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 LETM1P2-201ENST00000597330 2178 ntBASIC17.63■□□□□ 0.41
SMAD6O43541 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 GNAS-203ENST00000306120 1878 ntBASIC17.63■□□□□ 0.41
SMAD6O43541 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMAD6O43541 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.63■□□□□ 0.41
SMAD6O43541 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 ELK2BP-201ENST00000415014 1224 ntBASIC17.63■□□□□ 0.41
SMAD6O43541 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.63■□□□□ 0.41
SMAD6O43541 RNA5SP415-201ENST00000517246 115 ntBASIC17.63■□□□□ 0.41
SMAD6O43541 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.63■□□□□ 0.41
SMAD6O43541 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.63■□□□□ 0.41
SMAD6O43541 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms