Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PER1O15534 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PER1O15534 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.63■■□□□ 1.37
PER1O15534 ELK2BP-201ENST00000415014 1224 ntBASIC23.63■■□□□ 1.37
PER1O15534 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PER1O15534 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
PER1O15534 IGHV3-22-201ENST00000520721 359 ntBASIC23.63■■□□□ 1.37
PER1O15534 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC23.63■■□□□ 1.37
PER1O15534 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC23.63■■□□□ 1.37
PER1O15534 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC23.63■■□□□ 1.37
PER1O15534 AP001005.1-201ENST00000571755 1248 ntBASIC23.63■■□□□ 1.37
PER1O15534 KLK8-205ENST00000593490 267 ntTSL 3 BASIC23.63■■□□□ 1.37
PER1O15534 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC23.63■■□□□ 1.37
PER1O15534 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC23.63■■□□□ 1.37
PER1O15534 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PER1O15534 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC23.63■■□□□ 1.37
PER1O15534 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PER1O15534 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PER1O15534 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC23.62■■□□□ 1.37
PER1O15534 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PER1O15534 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
PER1O15534 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
PER1O15534 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PER1O15534 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PER1O15534 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
PER1O15534 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC23.62■■□□□ 1.37
PER1O15534 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PER1O15534 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PER1O15534 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC23.62■■□□□ 1.37
PER1O15534 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC23.62■■□□□ 1.37
PER1O15534 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC23.62■■□□□ 1.37
PER1O15534 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PER1O15534 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC23.62■■□□□ 1.37
PER1O15534 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.62■■□□□ 1.37
PER1O15534 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.62■■□□□ 1.37
PER1O15534 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC23.62■■□□□ 1.37
PER1O15534 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PER1O15534 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PER1O15534 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC23.62■■□□□ 1.37
PER1O15534 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
PER1O15534 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PER1O15534 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC23.62■■□□□ 1.37
PER1O15534 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PER1O15534 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
PER1O15534 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PER1O15534 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PER1O15534 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
PER1O15534 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PER1O15534 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PER1O15534 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC23.61■■□□□ 1.37
PER1O15534 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PER1O15534 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PER1O15534 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PER1O15534 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PER1O15534 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PER1O15534 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC23.61■■□□□ 1.37
PER1O15534 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC23.61■■□□□ 1.37
PER1O15534 CIPC-205ENST00000555437 566 ntTSL 3 BASIC23.61■■□□□ 1.37
PER1O15534 AC105339.3-201ENST00000560043 636 ntBASIC23.61■■□□□ 1.37
PER1O15534 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PER1O15534 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
PER1O15534 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC23.61■■□□□ 1.37
PER1O15534 AL023806.1-201ENST00000603994 1649 ntBASIC23.61■■□□□ 1.37
PER1O15534 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PER1O15534 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PER1O15534 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PER1O15534 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PER1O15534 EGFEM1P-202ENST00000431685 1563 ntBASIC23.61■■□□□ 1.37
PER1O15534 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC23.61■■□□□ 1.37
PER1O15534 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC23.6■■□□□ 1.37
PER1O15534 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC23.6■■□□□ 1.37
PER1O15534 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC23.6■■□□□ 1.37
PER1O15534 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC23.6■■□□□ 1.37
PER1O15534 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC23.6■■□□□ 1.37
PER1O15534 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC23.6■■□□□ 1.37
PER1O15534 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC23.6■■□□□ 1.37
PER1O15534 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.6■■□□□ 1.37
PER1O15534 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC23.6■■□□□ 1.37
PER1O15534 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC23.6■■□□□ 1.37
PER1O15534 TERC-201ENST00000602385 541 ntBASIC23.6■■□□□ 1.37
PER1O15534 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.6■■□□□ 1.37
PER1O15534 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.6■■□□□ 1.37
PER1O15534 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER1O15534 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms