Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12□□□□□ -0.49
NDUFA1O15239 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12□□□□□ -0.49
NDUFA1O15239 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
NDUFA1O15239 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NDUFA1O15239 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12□□□□□ -0.49
NDUFA1O15239 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
NDUFA1O15239 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12□□□□□ -0.49
NDUFA1O15239 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12□□□□□ -0.49
NDUFA1O15239 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12□□□□□ -0.49
NDUFA1O15239 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12□□□□□ -0.49
NDUFA1O15239 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12□□□□□ -0.49
NDUFA1O15239 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12□□□□□ -0.49
NDUFA1O15239 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
NDUFA1O15239 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
NDUFA1O15239 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12□□□□□ -0.49
NDUFA1O15239 AL024508.2-201ENST00000607749 1894 ntBASIC12□□□□□ -0.49
NDUFA1O15239 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.99□□□□□ -0.49
NDUFA1O15239 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
NDUFA1O15239 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC11.99□□□□□ -0.49
NDUFA1O15239 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
NDUFA1O15239 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
NDUFA1O15239 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC11.99□□□□□ -0.49
NDUFA1O15239 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFA1O15239 RBM17P1-201ENST00000453646 1190 ntBASIC11.99□□□□□ -0.49
NDUFA1O15239 GXYLT1P6-201ENST00000456472 1187 ntBASIC11.99□□□□□ -0.49
NDUFA1O15239 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC11.99□□□□□ -0.49
NDUFA1O15239 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC11.99□□□□□ -0.49
NDUFA1O15239 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFA1O15239 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NDUFA1O15239 AC104390.1-201ENST00000555663 520 ntBASIC11.99□□□□□ -0.49
NDUFA1O15239 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 USP36-216ENST00000589424 970 ntTSL 5 BASIC11.99□□□□□ -0.49
NDUFA1O15239 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC11.99□□□□□ -0.49
NDUFA1O15239 AL023803.3-201ENST00000615559 522 ntBASIC11.99□□□□□ -0.49
NDUFA1O15239 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.99□□□□□ -0.49
NDUFA1O15239 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
NDUFA1O15239 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
NDUFA1O15239 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFA1O15239 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
NDUFA1O15239 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.99□□□□□ -0.49
NDUFA1O15239 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NDUFA1O15239 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC11.99□□□□□ -0.49
NDUFA1O15239 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
NDUFA1O15239 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
NDUFA1O15239 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFA1O15239 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms