Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 AP006288.1-201ENST00000446065 395 ntBASIC19.98■□□□□ 0.79
ATP2A1O14983 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP2A1O14983 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.98■□□□□ 0.79
ATP2A1O14983 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP2A1O14983 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.98■□□□□ 0.79
ATP2A1O14983 OR7E47P-204ENST00000575924 449 ntBASIC19.98■□□□□ 0.79
ATP2A1O14983 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ATP2A1O14983 AC079781.4-201ENST00000641908 219 ntBASIC19.98■□□□□ 0.79
ATP2A1O14983 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP2A1O14983 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP2A1O14983 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP2A1O14983 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP2A1O14983 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP2A1O14983 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.97■□□□□ 0.79
ATP2A1O14983 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP2A1O14983 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.97■□□□□ 0.79
ATP2A1O14983 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP2A1O14983 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ATP2A1O14983 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP2A1O14983 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ATP2A1O14983 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ATP2A1O14983 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP2A1O14983 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.97■□□□□ 0.79
ATP2A1O14983 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ATP2A1O14983 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ATP2A1O14983 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP2A1O14983 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.97■□□□□ 0.79
ATP2A1O14983 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
ATP2A1O14983 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ATP2A1O14983 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.97■□□□□ 0.79
ATP2A1O14983 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP2A1O14983 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ATP2A1O14983 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ATP2A1O14983 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP2A1O14983 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.97■□□□□ 0.79
ATP2A1O14983 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP2A1O14983 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP2A1O14983 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP2A1O14983 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ATP2A1O14983 REXO1L11P-201ENST00000620964 1927 ntBASIC19.96■□□□□ 0.79
ATP2A1O14983 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP2A1O14983 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP2A1O14983 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP2A1O14983 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATP2A1O14983 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP2A1O14983 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.96■□□□□ 0.79
ATP2A1O14983 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.96■□□□□ 0.79
ATP2A1O14983 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.96■□□□□ 0.79
ATP2A1O14983 AC096734.2-201ENST00000562054 433 ntBASIC19.96■□□□□ 0.79
ATP2A1O14983 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ATP2A1O14983 AC005829.1-201ENST00000570002 483 ntBASIC19.96■□□□□ 0.79
ATP2A1O14983 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.96■□□□□ 0.79
ATP2A1O14983 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.96■□□□□ 0.79
ATP2A1O14983 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.96■□□□□ 0.79
ATP2A1O14983 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
ATP2A1O14983 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ATP2A1O14983 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP2A1O14983 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.96■□□□□ 0.79
ATP2A1O14983 AL590787.1-201ENST00000568856 1315 ntBASIC19.96■□□□□ 0.79
ATP2A1O14983 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP2A1O14983 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP2A1O14983 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.96■□□□□ 0.79
ATP2A1O14983 HTR7P1-202ENST00000624664 4411 ntBASIC19.96■□□□□ 0.79
ATP2A1O14983 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATP2A1O14983 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ATP2A1O14983 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP2A1O14983 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ATP2A1O14983 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.95■□□□□ 0.78
ATP2A1O14983 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.95■□□□□ 0.78
ATP2A1O14983 RHOQP3-201ENST00000437982 621 ntBASIC19.95■□□□□ 0.78
ATP2A1O14983 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP2A1O14983 AC018845.2-201ENST00000568326 409 ntBASIC19.95■□□□□ 0.78
ATP2A1O14983 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP2A1O14983 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP2A1O14983 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms