Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.45■□□□□ 0.54
SOX1O00570 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.45■□□□□ 0.54
SOX1O00570 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.45■□□□□ 0.54
SOX1O00570 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.45■□□□□ 0.54
SOX1O00570 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SOX1O00570 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.44■□□□□ 0.54
SOX1O00570 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SOX1O00570 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.44■□□□□ 0.54
SOX1O00570 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.44■□□□□ 0.54
SOX1O00570 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SOX1O00570 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.44■□□□□ 0.54
SOX1O00570 MYCLP1-201ENST00000372451 1075 ntBASIC18.44■□□□□ 0.54
SOX1O00570 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SOX1O00570 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.44■□□□□ 0.54
SOX1O00570 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.44■□□□□ 0.54
SOX1O00570 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.44■□□□□ 0.54
SOX1O00570 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.44■□□□□ 0.54
SOX1O00570 GNAQP1-201ENST00000444815 1067 ntBASIC18.44■□□□□ 0.54
SOX1O00570 BNIP3P42-201ENST00000454982 569 ntBASIC18.44■□□□□ 0.54
SOX1O00570 AC011495.1-201ENST00000498085 584 ntBASIC18.44■□□□□ 0.54
SOX1O00570 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.44■□□□□ 0.54
SOX1O00570 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.44■□□□□ 0.54
SOX1O00570 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 BNIP3P29-201ENST00000598302 571 ntBASIC18.44■□□□□ 0.54
SOX1O00570 AC011447.5-201ENST00000616168 564 ntBASIC18.44■□□□□ 0.54
SOX1O00570 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.44■□□□□ 0.54
SOX1O00570 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
SOX1O00570 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SOX1O00570 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.44■□□□□ 0.54
SOX1O00570 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.44■□□□□ 0.54
SOX1O00570 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.44■□□□□ 0.54
SOX1O00570 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.44■□□□□ 0.54
SOX1O00570 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.44■□□□□ 0.54
SOX1O00570 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SOX1O00570 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX1O00570 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.43■□□□□ 0.54
SOX1O00570 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.43■□□□□ 0.54
SOX1O00570 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SOX1O00570 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SOX1O00570 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.43■□□□□ 0.54
SOX1O00570 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
SOX1O00570 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.43■□□□□ 0.54
SOX1O00570 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.43■□□□□ 0.54
SOX1O00570 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.43■□□□□ 0.54
SOX1O00570 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.43■□□□□ 0.54
SOX1O00570 MIR6869-201ENST00000619434 62 ntBASIC18.43■□□□□ 0.54
SOX1O00570 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.43■□□□□ 0.54
SOX1O00570 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.43■□□□□ 0.54
SOX1O00570 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SOX1O00570 AC005082.1-201ENST00000413042 2259 ntBASIC18.43■□□□□ 0.54
SOX1O00570 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SOX1O00570 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SOX1O00570 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.43■□□□□ 0.54
SOX1O00570 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX1O00570 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SOX1O00570 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOX1O00570 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOX1O00570 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SOX1O00570 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.42■□□□□ 0.54
SOX1O00570 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOX1O00570 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.42■□□□□ 0.54
SOX1O00570 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SOX1O00570 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX1O00570 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX1O00570 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOX1O00570 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOX1O00570 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.42■□□□□ 0.54
SOX1O00570 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.42■□□□□ 0.54
SOX1O00570 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.42■□□□□ 0.54
SOX1O00570 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms