Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SDCBPO00560 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.92□□□□□ -0.02
SDCBPO00560 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SDCBPO00560 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.92□□□□□ -0.02
SDCBPO00560 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.92□□□□□ -0.02
SDCBPO00560 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SDCBPO00560 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
SDCBPO00560 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SDCBPO00560 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SDCBPO00560 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.92□□□□□ -0.02
SDCBPO00560 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.92□□□□□ -0.02
SDCBPO00560 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SDCBPO00560 AC097493.4-201ENST00000641197 219 ntBASIC14.92□□□□□ -0.02
SDCBPO00560 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.92□□□□□ -0.02
SDCBPO00560 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.92□□□□□ -0.02
SDCBPO00560 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.92□□□□□ -0.02
SDCBPO00560 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 AC079328.2-201ENST00000561241 3354 ntBASIC14.92□□□□□ -0.02
SDCBPO00560 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SDCBPO00560 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SDCBPO00560 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDCBPO00560 PCDHB19P-201ENST00000570871 2371 ntBASIC14.91□□□□□ -0.02
SDCBPO00560 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SDCBPO00560 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
SDCBPO00560 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
SDCBPO00560 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.91□□□□□ -0.02
SDCBPO00560 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.91□□□□□ -0.02
SDCBPO00560 TERF1P1-201ENST00000311003 1181 ntBASIC14.91□□□□□ -0.02
SDCBPO00560 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
SDCBPO00560 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.91□□□□□ -0.02
SDCBPO00560 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SDCBPO00560 AGGF1P2-201ENST00000426656 2106 ntBASIC14.91□□□□□ -0.02
SDCBPO00560 RASA4DP-201ENST00000460726 1199 ntBASIC14.91□□□□□ -0.02
SDCBPO00560 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.91□□□□□ -0.02
SDCBPO00560 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.91□□□□□ -0.02
SDCBPO00560 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.91□□□□□ -0.02
SDCBPO00560 AC116407.2-201ENST00000613639 860 ntBASIC14.91□□□□□ -0.02
SDCBPO00560 LINC01451-201ENST00000623792 534 ntBASIC14.91□□□□□ -0.02
SDCBPO00560 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.91□□□□□ -0.02
SDCBPO00560 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.91□□□□□ -0.02
SDCBPO00560 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SDCBPO00560 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
SDCBPO00560 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 LINC00167-201ENST00000530583 1419 ntBASIC14.91□□□□□ -0.02
SDCBPO00560 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.91□□□□□ -0.02
SDCBPO00560 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDCBPO00560 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.91□□□□□ -0.02
SDCBPO00560 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SDCBPO00560 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms